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Report for CCDS81691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81691.1 Public Homo sapiens 12 POU6F1 24 110 108 CCDS HistoryNCBI Gene:5463Re-query CCDS DB by CCDS ID:81691.1Re-query CCDS DB by GeneID:5463See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81691.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000333640.12 ENSP00000330190.11 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000333640.12Link to Ensembl Protein Viewer:ENSP00000330190.11Re-query CCDS DB by Nucleotide ID:ENST00000333640Re-query CCDS DB by Protein ID:ENSP00000330190
Original member Current member NCBI NM_001330422.2 NP_001317351.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001330422.2Link to Protein Sequence:NP_001317351.1Re-query CCDS DB by Nucleotide ID:NM_001330422Re-query CCDS DB by Protein ID:NP_001317351Link to BLAST:NP_001317351.1

Chromosomal Locations for CCDS 81691.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 51190247 51190592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51191596 51191764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51192330 51192471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51195970 51196173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51196799 51196927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51197770 51198023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51198550 51198775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51199747 51199868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51204173 51204368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 51206789 51206836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1836 nt):
ATGGATCCTGGAGCCGGGTCAGAGACATCTCTGACTGTCAATGAGCAGGTCATCGTGATGTCAGGTCATG
AGACCATCCGAGTGCTGGAAGTCGGAGTGGATGCCCAACTCCCTGCTGAGGAAGAGAGCAAAGGACTGGA
GGGTGTGGCCGCCGAGGGCTCCCAGAGCGGAGACCCTGCTGAAGCCAGTCAAGCTGCTGGTGAAGCTGGG
CCAGACAACCTGGGCTCCTCTGCAGAGGCAACTGTGAAGTCACCCCCGGGGATCCCTCCGAGCCCTGCCA
CTGCCATTGCCACCTTCAGCCAAGCCCCAAGCCAGCCTCAGGCATCGCAGACCCTGACGCCACTGGCTGT
ACAAGCTGCCCCCCAGGTCTTGACTCAGGAAAACTTAGCCACAGTTCTGACAGGAGTTATGGTTCCAGCA
GGGGCAGTTACTCAACCTCTTCTTATCCCCATCAGTATTGCAGGTCAAGTGGCTGGTCAGCAGGGGCTGG
CCGTGTGGACAATTCCTACAGCAACTGTGGCTGCCCTCCCAGGACTGACCGCTGCTTCTCCTACGGGGGG
AGTGTTCAAGCCACCTTTAGCCGGTCTCCAAGCAGCTGCTGTGCTGAACACCGCTCTTCCGGCACCGGTA
CAAGCTGCCGCACCAGTACAGGCCTCCTCGACGGCCCAACCCCGGCCACCAGCCCAGCCCCAGACGCTGT
TCCAGACCCAGCCGCTGCTGCAGACCACACCTGCCATCCTCCCGCAGCCCACTGCTGCCACCGCTGCTGC
CCCTACCCCCAAGCCAGTGGACACCCCCCCACAGATCACCGTCCAGCCTGCAGGCTTCGCATTTAGCCCA
GGAATCATCAGTGCTGCTTCCCTCGGGGGACAGACCCAGATCCTGGGGTCCCTCACTACAGCTCCAGTCA
TTACCAGCGCCATTCCCAGCATGCCAGGGATCAGCAGTCAGATCCTCACCAATGCTCAGGGACAGGTTAT
TGGAACCCTTCCATGGGTAGTGAACTCAGCTAGTGTGGCGGCCCCAGCACCAGCCCAAAGCCTGCAGGTC
CAGGCCGTGACCCCCCAGCTGTTGTTGAACGCCCAGGGCCAGGTGATTGCGACCCTGGCTAGCAGCCCCC
TGCCTCCACCTGTGGCTGTCCGGAAGCCAAGCACACCTGAGTCCCCTGCTAAGAGTGAGGTGCAGCCCAT
CCAGCCCACACCAACCGTGCCCCAGCCTGCTGTGGTCATTGCCAGCCCAGCTCCAGCCGCCAAGCCATCT
GCCTCTGCTCCTATCCCAATTACCTGCTCAGAGACCCCCACCGTCAGCCAGTTGGTGTCCAAGCCACATA
CTCCAAGTCTGGATGAGGATGGGATCAACTTAGAAGAGATCCGGGAGTTTGCCAAGAACTTTAAGATCCG
GCGGCTCTCGCTGGGCCTTACACAGACCCAGGTGGGTCAGGCTCTGACTGCAACGGAAGGTCCAGCCTAC
AGCCAGTCAGCCATCTGCCGGTTCGAGAAGCTAGACATCACACCCAAGAGTGCCCAGAAGCTAAAGCCGG
TGCTGGAAAAGTGGCTAAACGAAGCTGAACTGCGGAACCAGGAAGGCCAGCAGAACCTGATGGAGTTTGT
GGGAGGCGAGCCCTCCAAGAAACGCAAACGCCGCACCTCCTTCACCCCCCAGGCCATAGAGGCTCTCAAT
GCCTATTTTGAGAAGAACCCACTGCCCACAGGCCAGGAGATCACTGAAATTGCTAAGGAGCTCAACTACG
ACCGTGAGGTAGTGCGGGTCTGGTTCTGCAATCGGCGCCAGACGCTCAAGAACACCAGCAAGCTGAACGT
CTTTCAGATCCCTTAG

Translation (611 aa):
MDPGAGSETSLTVNEQVIVMSGHETIRVLEVGVDAQLPAEEESKGLEGVAAEGSQSGDPAEASQAAGEAG
PDNLGSSAEATVKSPPGIPPSPATAIATFSQAPSQPQASQTLTPLAVQAAPQVLTQENLATVLTGVMVPA
GAVTQPLLIPISIAGQVAGQQGLAVWTIPTATVAALPGLTAASPTGGVFKPPLAGLQAAAVLNTALPAPV
QAAAPVQASSTAQPRPPAQPQTLFQTQPLLQTTPAILPQPTAATAAAPTPKPVDTPPQITVQPAGFAFSP
GIISAASLGGQTQILGSLTTAPVITSAIPSMPGISSQILTNAQGQVIGTLPWVVNSASVAAPAPAQSLQV
QAVTPQLLLNAQGQVIATLASSPLPPPVAVRKPSTPESPAKSEVQPIQPTPTVPQPAVVIASPAPAAKPS
ASAPIPITCSETPTVSQLVSKPHTPSLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAY
SQSAICRFEKLDITPKSAQKLKPVLEKWLNEAELRNQEGQQNLMEFVGGEPSKKRKRRTSFTPQAIEALN
AYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKLNVFQIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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