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Report for CCDS76656.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76656.1 Public Homo sapiens 14 SALL2 24 110 108 CCDS HistoryNCBI Gene:6297Re-query CCDS DB by CCDS ID:76656.1Re-query CCDS DB by GeneID:6297See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76656.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000450879.2 ENSP00000396773.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450879.2Link to Ensembl Protein Viewer:ENSP00000396773.2Re-query CCDS DB by Nucleotide ID:ENST00000450879Re-query CCDS DB by Protein ID:ENSP00000396773
Original member Current member NCBI NM_001291447.2 NP_001278376.1 Accepted alive Link to Nucleotide Sequence:NM_001291447.2Link to Protein Sequence:NP_001278376.1Re-query CCDS DB by Nucleotide ID:NM_001291447Re-query CCDS DB by Protein ID:NP_001278376Link to BLAST:NP_001278376.1

Chromosomal Locations for CCDS 76656.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21522008 21522244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21522833 21524931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21525337 21525654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21526061 21526127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2721 nt):
ATGGCGCACGAATCCGAGAGGAGCTCTCGTCTCGGGGTGCCCTGCGGGGAGCCGGCAGAGCTCGGAGGTG
ATGCTAGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTGACCCAACTGAATT
CCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGTGATAATTGGGGGCCAGGAGAACCCC
AACAACTCTTCGGCCTCCTCTGAACCCCGGCCTGAGGGTCACAATAATCCTCAGGTCATGGACACAGAGC
ATAGCAACCCCCCAGATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGAGGAGAGGAGA
GGAGTCTTCAGGGCATTTCCTGGTCGCTGCCACAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCTT
TACCACCCACTGGGGTCACAGCATCCTTTCTCTGCTGGAGGGGTTGGGCGAAGCCACAAACCCACCCCTG
CCCCTTCCCCAGCCTTGCCAGGCAGCACAGATCAGCTGATTGCCTCGCCTCATCTGGCATTCCCAAGCAC
CACGGGACTACTGGCAGCACAGTGTCTTGGGGCAGCCCGAGGCCTTGAGGCCACTGCCTCCCCAGGGCTC
CTGAAGCCAAAGAATGGAAGTGGTGAGCTGAGCTACGGAGAAGTGATGGGTCCCTTGGAGAAGCCTGGTG
GAAGGCACAAATGCCGCTTCTGTGCCAAAGTATTTGGCAGTGACAGTGCCCTGCAGATCCACCTTCGTTC
CCACACGGGTGAGAGGCCCTATAAGTGCAATGTCTGTGGAAACCGTTTTACCACCCGTGGCAACCTCAAA
GTGCATTTCCACCGGCATCGTGAGAAGTACCCACATGTGCAGATGAACCCACACCCAGTACCAGAGCACC
TAGACTATGTCATTACCAGCAGTGGCTTGCCTTATGGTATGTCCGTGCCACCAGAGAAGGCCGAGGAGGA
GGCAGCCACTCCAGGTGGAGGGGTTGAGCGCAAGCCTCTGGTGGCCTCCACAACAGCACTCAGTGCCACA
GAGAGCCTGACTCTGCTCTCCACCAGTGCAGGCACAGCCACGGCTCCAGGACTCCCTGCTTTCAATAAGT
TTGTGCTCATGAAAGCAGTGGAACCCAAGAATAAAGCTGATGAAAACACCCCCCCAGGGAGTGAGGGCTC
AGCCATCAGTGGAGTGGCAGAAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGTTGGTGACTTCACTA
CCAAGCTGGGCACTGCTTACCAACCACTTCAAGTCCACTGGCAGCTTCCCCTTCCCCTATGTGCTAGAGC
CCTTGGGGGCCTCACCCTCTGAGACATCAAAGCTGCAGCAACTGGTAGAAAAGATTGACCGGCAAGGAGC
TGTGGCGGTGACCTCAGCTGCCTCAGGAGCCCCCACCACCTCTGCCCCTGCACCTTCATCCTCAGCCTCT
TCTGGACCTAACCAGTGTGTCATCTGTCTCCGAGTGCTTAGCTGTCCTCGGGCCCTACGCCTTCATTATG
GCCAACATGGAGGTGAGAGGCCCTTCAAATGCAAAGTGTGTGGCAGAGCCTTCTCCACCAGGGGTAATCT
GCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCCATCTGCCAG
AAGAAGTTCACCAATGCTGTCACTCTGCAGCAGCATGTCCGGATGCACCTGGGGGGCCAGATCCCCAACG
GTGGTACTGCACTCCCTGAAGGTGGAGGAGCTGCTCAGGAGAATGGCTCCGAGCAATCTACAGTCTCCGG
GGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCAGCCATCACCGGAAGAGGAGTTGTCTGAGGAGGAGGAA
GAGGAGGATGAGGAAGAAGAGGAAGATGTGACTGATGAAGATTCCCTGGCAGGGAGAGGCTCAGAGAGTG
GAGGTGAGAAGGCAATATCAGTGAGAGGTGATTCAGAAGAGGCATCTGGGGCAGAGGAGGAGGTGGGGAC
AGTGGCGGCAGCAGCCACAGCTGGGAAGGAGATGGACAGTAATGAGAAAACTACTCAACAGTCTTCTTTG
CCACCACCACCACCACCTGACAGCCTGGATCAGCCTCAGCCAATGGAGCAGGGAAGCAGTGGTGTTTTAG
GAGGCAAGGAAGAGGGGGGCAAACCGGAGAGAAGCTCAAGTCCGGCATCAGCACTCACCCCAGAAGGGGA
AGCCACCAGCGTGACCTTGGTAGAGGAGCTGAGCCTGCAGGAGGCAATGAGAAAGGAGCCAGGAGAGAGC
AGCAGCAGAAAGGCCTGCGAAGTGTGTGGCCAGGCCTTTCCCTCCCAGGCAGCTCTGGAGGAGCATCAGA
AGACCCACCCCAAGGAGGGGCCGCTCTTCACTTGTGTTTTCTGCAGGCAGGGCTTTCTTGAGCGGGCTAC
CCTCAAGAAGCATATGCTCCTGGCACACCACCAGAACCAGTATGTGGCATTCCTGTCAAATGGCCTGCCC
ATGAAGCCCTGGAATTCCAGCTCCACCTCCACTACCACTCCAAGCCTGGCCCCACCAGTGCTGTTTGGCC
TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGGAGAAGACAGCCCCCCT
CCTATTTCAGCCTCCTGCACCCAAGGCAGTGCCTGAGAAGCCCATCATAGACAAGAAGTAG

Translation (906 aa):
MAHESERSSRLGVPCGEPAELGGDASEEDHPQVCAKCCAQFTDPTEFLAHQNACSTDPPVMVIIGGQENP
NNSSASSEPRPEGHNNPQVMDTEHSNPPDSGSSVPTDPTWGPERRGEESSGHFLVAATGAETPKQAFFHL
YHPLGSQHPFSAGGVGRSHKPTPAPSPALPGSTDQLIASPHLAFPSTTGLLAAQCLGAARGLEATASPGL
LKPKNGSGELSYGEVMGPLEKPGGRHKCRFCAKVFGSDSALQIHLRSHTGERPYKCNVCGNRFTTRGNLK
VHFHRHREKYPHVQMNPHPVPEHLDYVITSSGLPYGMSVPPEKAEEEAATPGGGVERKPLVASTTALSAT
ESLTLLSTSAGTATAPGLPAFNKFVLMKAVEPKNKADENTPPGSEGSAISGVAESSTATRMQLSKLVTSL
PSWALLTNHFKSTGSFPFPYVLEPLGASPSETSKLQQLVEKIDRQGAVAVTSAASGAPTTSAPAPSSSAS
SGPNQCVICLRVLSCPRALRLHYGQHGGERPFKCKVCGRAFSTRGNLRAHFVGHKASPAARAQNSCPICQ
KKFTNAVTLQQHVRMHLGGQIPNGGTALPEGGGAAQENGSEQSTVSGARSFPQQQSQQPSPEEELSEEEE
EEDEEEEEDVTDEDSLAGRGSESGGEKAISVRGDSEEASGAEEEVGTVAAAATAGKEMDSNEKTTQQSSL
PPPPPPDSLDQPQPMEQGSSGVLGGKEEGGKPERSSSPASALTPEGEATSVTLVEELSLQEAMRKEPGES
SSRKACEVCGQAFPSQAALEEHQKTHPKEGPLFTCVFCRQGFLERATLKKHMLLAHHQNQYVAFLSNGLP
MKPWNSSSTSTTTPSLAPPVLFGLGTVAGKVPPTMGSREAKEKTAPLLFQPPAPKAVPEKPIIDKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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