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Report for CCDS72984.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72984.1 Public Homo sapiens 1 SUCO 24 110 108 CCDS HistoryNCBI Gene:51430Re-query CCDS DB by CCDS ID:72984.1Re-query CCDS DB by GeneID:51430See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 72984.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000616058.4 ENSP00000479061.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616058.4Link to Ensembl Protein Viewer:ENSP00000479061.1Re-query CCDS DB by Nucleotide ID:ENST00000616058Re-query CCDS DB by Protein ID:ENSP00000479061
Original member Current member NCBI NM_001282751.2 NP_001269680.1 Accepted alive Link to Nucleotide Sequence:NM_001282751.2Link to Protein Sequence:NP_001269680.1Re-query CCDS DB by Nucleotide ID:NM_001282751Re-query CCDS DB by Protein ID:NP_001269680Link to BLAST:NP_001269680.1

Chromosomal Locations for CCDS 72984.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 172588791 172589926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172590984 172591071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172600064 172600168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172602064 172602218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172602696 172602787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172608747 172608802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172609816 172610259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2076 nt):
ATGGAGCCGTCAACACCAGATACTCCAAAAGAGAGTCCCATTGTACAGTTAGTTCAAGAGGAGGAAGAGG
AGGCAAGTCCATCTACAGTGACCCTTCTGGGCAGCGGTGAACAGGAAGATGAATCATCACCCTGGTTTGA
GTCAGAGACACAAATATTTTGCAGTGAACTGACCACAATTTGTTGTATTTCTAGTTTTTCAGAATACATA
TATAAATGGTGTTCAGTTAGAGTTGCTCTTTATCGGCAGCGCAGCCGAACTGCTTTGAGTAAAGGAAAAG
ATTATCTTGTGTTAGCTCAACCACCCTTACTACTTCCTGCGGAATCAGTAGATGTTTCAGTATTGCAACC
TCTGAGTGGAGAATTGGAAAATACGAATATAGAAAGGGAAGCTGAAACTGTTGTTCTGGGTGATTTAAGT
AGTAGTATGCACCAGGATGACTTGGTGAATCACACTGTAGATGCAGTTGAACTTGAACCAAGCCATTCTC
AAACTCTTTCTCAGTCTCTTCTTTTAGATATTACCCCAGAAATCAATCCCTTGCCTAAAATAGAAGTATC
TGAGTCTGTTGAATATGAGGCAGGACATATACCATCACCAGTGATTCCCCAAGAGAGTTCTGTTGAGATC
GATAATGAAACAGAACAAAAGTCTGAGAGCTTTAGTTCTATAGAGAAACCATCTATTACCTATGAAACAA
ATAAAGTTAATGAGTTAATGGATAATATTATAAAAGAAGATGTGAACTCCATGCAAATTTTCACAAAGCT
GTCTGAAACAATAGTGCCACCAATAAATACAGCCACTGTACCCGACAATGAAGATGGGGAAGCCAAAATG
AATATAGCTGACACAGCAAAGCAAACTTTGATTTCTGTTGTGGATTCTTCTTCATTACCTGAAGTAAAAG
AAGAAGAACAGTCTCCAGAAGATGCCCTTTTGAGAGGGTTACAGAGGACAGCTACAGATTTTTATGCTGA
ATTGCAAAATTCTACAGATCTAGGATATGCTAATGGAAATCTTGTACATGGATCAAACCAAAAGGAGTCA
GTATTTATGAGACTTAATAATCGTATTAAAGCCTTAGAAGTTAACATGTCTCTCAGTGGTCGCTATCTGG
AGGAGCTTAGCCAAAGGTACCGAAAACAAATGGAAGAAATGCAAAAGGCTTTCAATAAAACAATCGTGAA
ACTTCAGAATACTTCAAGAATAGCAGAGGAGCAGGATCAGCGGCAAACTGAAGCCATCCAGTTGCTACAG
GCACAGCTGACCAACATGACACAGCTTGTTTCAAATTTATCAGCAACAGTAGCAGAATTGAAACGGGAGG
TTTCAGATCGACAAAGCTATCTTGTCATATCTTTGGTTCTTTGTGTTGTCTTGGGACTGATGCTTTGTAT
GCAGCGTTGTCGAAATACTTCTCAATTTGATGGAGATTATATTTCAAAACTTCCTAAAAGTAATCAGTAT
CCAAGCCCTAAAAGGTGTTTCTCTTCCTATGATGATATGAATTTGAAAAGAAGAACTTCATTCCCACTCA
TGAGATCCAAGTCTCTACAGTTAACTGGCAAAGAAGTAGACCCAAATGATTTGTACATTGTAGAACCCCT
CAAGTTTTCTCCAGAAAAGAAGAAGAAGCGCTGCAAGTACAAAATTGAAAAAATTGAGACCATAAAGCCT
GAAGAACCATTGCACCCCATAGCCAATGGCGACATAAAAGGAAGAAAGCCCTTTACGAACCAGAGAGATT
TTTCTAATATGGGAGAAGTTTATCACTCTTCTTATAAAGGTCCTCCATCTGAAGGAAGCTCAGAAACTTC
ATCACAGTCAGAAGAGTCCTATTTTTGTGGCATTTCAGCTTGCACAAGTCTGTGCAATGGACAGTCTCAA
AAGACAAAAACTGAGAAGAGGGCTTTAAAACGAAGACGATCTAAAGTCCAAGACCAAGGAAAATTGATAA
AAACTCTAATACAGACTAAGTCGGGATCATTGCCGAGCCTGCATGACATAATCAAAGGAAACAAAGAGAT
CACCGTGGGAACATTTGGTGTTACAGCAGTCTCGGGACATATCTAA

Translation (691 aa):
MEPSTPDTPKESPIVQLVQEEEEEASPSTVTLLGSGEQEDESSPWFESETQIFCSELTTICCISSFSEYI
YKWCSVRVALYRQRSRTALSKGKDYLVLAQPPLLLPAESVDVSVLQPLSGELENTNIEREAETVVLGDLS
SSMHQDDLVNHTVDAVELEPSHSQTLSQSLLLDITPEINPLPKIEVSESVEYEAGHIPSPVIPQESSVEI
DNETEQKSESFSSIEKPSITYETNKVNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKM
NIADTAKQTLISVVDSSSLPEVKEEEQSPEDALLRGLQRTATDFYAELQNSTDLGYANGNLVHGSNQKES
VFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQNTSRIAEEQDQRQTEAIQLLQ
AQLTNMTQLVSNLSATVAELKREVSDRQSYLVISLVLCVVLGLMLCMQRCRNTSQFDGDYISKLPKSNQY
PSPKRCFSSYDDMNLKRRTSFPLMRSKSLQLTGKEVDPNDLYIVEPLKFSPEKKKKRCKYKIEKIETIKP
EEPLHPIANGDIKGRKPFTNQRDFSNMGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQSQ
KTKTEKRALKRRRSKVQDQGKLIKTLIQTKSGSLPSLHDIIKGNKEITVGTFGVTAVSGHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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