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Report for CCDS6952.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6952.2 Public Homo sapiens 9 DDX31 24 110 108 CCDS HistoryNCBI Gene:64794Re-query CCDS DB by CCDS ID:6952.2Re-query CCDS DB by GeneID:64794See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6952.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310532.7 ENSP00000310539.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000310532.7Link to Ensembl Protein Viewer:ENSP00000310539.2Re-query CCDS DB by Nucleotide ID:ENST00000310532Re-query CCDS DB by Protein ID:ENSP00000310539
Original member Current member NCBI NM_138620.2 NP_619526.2 Accepted alive Link to Nucleotide Sequence:NM_138620.2Link to Protein Sequence:NP_619526.2Re-query CCDS DB by Nucleotide ID:NM_138620Re-query CCDS DB by Protein ID:NP_619526Link to BLAST:NP_619526.2

Chromosomal Locations for CCDS 6952.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 132638361 132638363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132642004 132642063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132645895 132646071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132646823 132647058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132648189 132648295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132648432 132648551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132650234 132650298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132651075 132651116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132652448 132652492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132658671 132658735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132659710 132659780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132661208 132661251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132662261 132662336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132662439 132662695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 132669860 132669934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1443 nt):
ATGGCAGCCGCCGACGGTTCGCTCTTCGACAACCCCAGGACGTTCTCCAGACGTCCCCCAGCCCAGGCGA
GTCGGCAAGCAAAGGCTACGAAAAGAAAATACCAAGCGTCCAGTGAGGCTCCCCCAGCGAAACGGAGGAA
CGAAACTTCATTTCTCCCAGCCAAGAAAACTAGTGTTAAAGAAACTCAGAGGACTTTTAAGGGGAACGCA
CAAAAAATGTTTTCTCCAAAGAAGCATTCGGTTAGCACAAGTGATAGAAACCAGGAGGAGAGACAGTGCA
TTAAGACTTCATCACTGTTTAAAAACAACCCTGACATTCCAGAACTCCACAGACCTGTGGTAAAGCAGGT
GCAAGAAAAAGTGTTTACTTCAGCTGCTTTTCATGAGCTGGGCCTCCACCCACATTTAATTTCCACAATA
AATACGGTCTTAAAAATGTCTAGTATGACCAGTGTTCAGAAGCAAAGTATTCCTGTGTTGCTGGAAGGCA
GAGATGCTCTCGTGAGATCCCAGACGGGCTCAGGTAAAACTCTTGCCTATTGCATCCCTGTGGTCCAGTC
CCTTCAAGCAATGGAGTCAAAAATACAGCGCAGTGATGGCCCCTATGCCCTGGTGCTCGTGCCAACGAGA
GAGCTAGCTCTACAAAGCTTTGACACTGTCCAGAAACTGCTTAAGCCTTTCACCTGGATTGTGCCTGGAG
TGTTAATGGGAGGAGAGAAGAGAAAATCAGAAAAGGCCAGACTCCGCAAAGGAATAAATATCCTTATCTC
AACTCCTGGACGCCTGGTGGATCATATAAAATCCACAAAGAACATTCATTTTAGTCGGCTGCGGTGGTTG
GTGTTTGATGAAGCAGACAGAATCTTGGATTTGGGTTTTGAAAAGGACATCACAGTGATACTTAATGCTG
TAAATGCTGAATGCCAAAAACGACAGAATGTCTTGCTATCAGCGACACTCACAGAAGGTGTAACGCGGCT
AGCTGATATCAGTTTGCATGATCCAGTCAGTATTTCTGTCCTGGACAAGAGCCATGACCAGTTGAACCCA
AAGGACAAAGCGGTCCAGGAGGTCTGTCCTCCACCAGCTGGCGACAAGCTGGACAGCTTTGCAATACCAG
AGAGTCTCAAGCAGCATGTGACTGTGGTTCCCAGCAAACTGAGGCTTGTCTGCCTAGCGGCCTTCATCCT
TCAGAAATGCAAGTTTGAGGAAGACCAGAAGATGGTTGTCTTTTTCTCAAGTTGCGAGCTGGTGGAGTTC
CACTACAGCCTCTTCCTACAGACCCTGCTGAGCAGCTCAGGGGCGCCGGCATCAGGGCAGTTGCCATCTG
CCTCCATGCGATTAAAATTCCTACGGCTGCATGGCGGCATGGAGCAGGAGGAAAGAACAGCAGTGTTTCA
GGAATTTTCACATTCCAGAAGAGGCGTCCTTCTTTGCACGTGA

Translation (480 aa):
MAAADGSLFDNPRTFSRRPPAQASRQAKATKRKYQASSEAPPAKRRNETSFLPAKKTSVKETQRTFKGNA
QKMFSPKKHSVSTSDRNQEERQCIKTSSLFKNNPDIPELHRPVVKQVQEKVFTSAAFHELGLHPHLISTI
NTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTR
ELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFSRLRWL
VFDEADRILDLGFEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDPVSISVLDKSHDQLNP
KDKAVQEVCPPPAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEF
HYSLFLQTLLSSSGAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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