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Report for CCDS69243.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69243.1 Public Homo sapiens 6 FAM120B 24 110 108 CCDS HistoryNCBI Gene:84498Re-query CCDS DB by CCDS ID:69243.1Re-query CCDS DB by GeneID:84498See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69243.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000625626.1 ENSP00000485793.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000625626.1Link to Ensembl Protein Viewer:ENSP00000485793.1Re-query CCDS DB by Nucleotide ID:ENST00000625626Re-query CCDS DB by Protein ID:ENSP00000485793
Original member Current member NCBI NM_001286381.2 NP_001273310.1 Accepted alive Link to Nucleotide Sequence:NM_001286381.2Link to Protein Sequence:NP_001273310.1Re-query CCDS DB by Nucleotide ID:NM_001286381Re-query CCDS DB by Protein ID:NP_001273310Link to BLAST:NP_001273310.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273310.1 242 Q96EK7-3 242 100% 0 0

Chromosomal Locations for CCDS 69243.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 170330538 170330550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170348151 170348323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170358226 170358318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170388287 170388493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170391013 170391121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170395487 170395579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 170404550 170404590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (729 nt):
ATGACCATTCCAGGGGGAACGCCTAGTTTGAAAATATTATGGCTGAACCAAGAGCCAGAAATACAGGTTC
GGCGCTTGGACACACTCCTAGCCTGTTTCAATCTTTCCTCCTCAAGAGAAGAGCTGCAGGCTGTCGAAAG
CCCATTTCAAGCTTTGTGCTGCCTCTTGATCTACCTCTTTGTCCAGGTGGACACGCTTTGCCTGGAGGAT
TTGCATGCGTTTATTGCGCAGGCCTTGTGCCTCCAAGGAAAATCCACCTCGCAGCTTGTAAATCTACAGC
CTGATTACATCAACCCCAGAGCCGTGCAGCTGGGCTCCCTTCTCGTCCGCGGCCTCACCACTCTGGTTTT
AGTCAACAGCGCATGTGGCTTCCCCTGGAAGACGAGTGATTTCATGCCCTGGAATGTATTTGACGGGAAG
CTTTTTCATCAGAAGTACTTGCAATCTGAAAAGGGTTATGCTGTGGAGGTTCTTTTAGAACAAAATAGAT
CTCGGCTCACCAAATTCCACAACCTGAAGGCAGTCGTCTGCAAGGCCTGCATGAAGGAGAACAGACGCAT
CACTGGCCGAGCCCACTGGGGCTCACACCACGCAGGGAGGTGGGGAAGACAGGGCTCCAGCTACCACAGG
ACGGGCTCTGGGTATAGCCGTTCCAGTCAGGGACAGCCGTGGAGAGACCAGGGACCAGGAAGCAGACAGT
ATGAGCATGACCAGTGGAGAAGGTACTAG

Translation (242 aa):
MTIPGGTPSLKILWLNQEPEIQVRRLDTLLACFNLSSSREELQAVESPFQALCCLLIYLFVQVDTLCLED
LHAFIAQALCLQGKSTSQLVNLQPDYINPRAVQLGSLLVRGLTTLVLVNSACGFPWKTSDFMPWNVFDGK
LFHQKYLQSEKGYAVEVLLEQNRSRLTKFHNLKAVVCKACMKENRRITGRAHWGSHHAGRWGRQGSSYHR
TGSGYSRSSQGQPWRDQGPGSRQYEHDQWRRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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