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Report for CCDS59132.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59132.1 Public Homo sapiens 9 FRMD3 24 110 108 CCDS HistoryNCBI Gene:257019Re-query CCDS DB by CCDS ID:59132.1Re-query CCDS DB by GeneID:257019See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59132.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376434.5 ENSP00000365617.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376434.5Link to Ensembl Protein Viewer:ENSP00000365617.1Re-query CCDS DB by Nucleotide ID:ENST00000376434Re-query CCDS DB by Protein ID:ENSP00000365617
Original member Current member NCBI NM_001244961.2 NP_001231890.1 Accepted alive Link to Nucleotide Sequence:NM_001244961.2Link to Protein Sequence:NP_001231890.1Re-query CCDS DB by Nucleotide ID:NM_001244961Re-query CCDS DB by Protein ID:NP_001231890Link to BLAST:NP_001231890.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001231890.1 362 A2A2Y4-3 362 100% 0 0

Chromosomal Locations for CCDS 59132.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 83243202 83243215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83248055 83248516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83290603 83290727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83298748 83298816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83299112 83299186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83309536 83309624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83310485 83310548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83311887 83311975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83313660 83313747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83331852 83331865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGTGTTCAGAAGGGGGCAGAGCCCACCAGTTGCTGAATTTAACTTGCTCCTGAAAGCTCACACTTTGG
AAACCTACGGGGTGGATCCTCACCCATGCAAGGATTCAACAGGCACAACAACATTTTTAGGATTCACAGC
TGCAGGCTTTGTGGTCTTTCAGGGAAATAAGAGAATCCATTTGATAAAATGGCCAGATGTCTGCAAATTG
AAGTTTGAAGGGAAGACATTTTATGTGATTGGCACCCAGAAGGAGAAAAAAGCCATGTTGGCATTCCATA
CTTCAACACCAGCTGCCTGCAAACATCTTTGGAAGTGTGGAGTGGAAAACCAGGCCTTTTATAAGTATGC
AAAATCCAGTCAGATCAAGACTGTATCAAGCAGCAAGATATTTTTTAAAGGAAGTAGATTTCGATATAGT
GGGAAAGTTGCCAAAGAGGTGGTGGAGGCCAGTTCCAAGATCCAGAGGGAGCCTCCTGAGGTGCACAGAG
CCAACATTACTCAGAGCCGCAGTTCCCACTCCTTGAACAAACAGCTCATCATTAACATGGAACCCCTGCA
GCCCCTGCTTCCTTCCCCCAGCGAGCAAGAAGAAGAACTTCCTCTGGGTGAGGGTGTTCCATTGCCTAAA
GAGGAGAACATTTCTGCTCCCTTGATCTCCAGCTCCCCAGTGAAGGCAGCCCGGGAGTATGAAGATCCCC
CTAGTGAAGAGGAAGATAAAATAAAAGAAGAACCTTTAACCATCTCTGAACTAGTGTACAACCCAAGTGC
CAGCCTGCTCCCCACCCCTGTGGATGACGATGAGATTGACATGCTCTTTGACTGTCCTTCTAGGCTTGAG
TTGGAAAGAGAAGACACAGATTCATTTGAGGATCTGGAAGCAGATGAAAACGCCTTTTTGATTGCTGAAG
AAGAGGAGCTGAAGGAGGCTCGCCGTGCTTTGTCGTGGAGCTATGACATTCTGACTGGCCATATTCGGGT
GAACCCACTGGTCAAGAGTTTTTCCAGGCTCCTTGTGGTGGGCCTGGGACTGCTGCTCTTTGTATTTCCC
CTGCTCCTCCTCCTTTTGGAGTCAGTCTCCATGCAGTAA

Translation (362 aa):
MVFRRGQSPPVAEFNLLLKAHTLETYGVDPHPCKDSTGTTTFLGFTAAGFVVFQGNKRIHLIKWPDVCKL
KFEGKTFYVIGTQKEKKAMLAFHTSTPAACKHLWKCGVENQAFYKYAKSSQIKTVSSSKIFFKGSRFRYS
GKVAKEVVEASSKIQREPPEVHRANITQSRSSHSLNKQLIINMEPLQPLLPSPSEQEEELPLGEGVPLPK
EENISAPLISSSPVKAAREYEDPPSEEEDKIKEEPLTISELVYNPSASLLPTPVDDDEIDMLFDCPSRLE
LEREDTDSFEDLEADENAFLIAEEEELKEARRALSWSYDILTGHIRVNPLVKSFSRLLVVGLGLLLFVFP
LLLLLLESVSMQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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