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Report for CCDS55528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55528.1 Public Homo sapiens X ZNF185 24 110 108 CCDS HistoryNCBI Gene:7739Re-query CCDS DB by CCDS ID:55528.1Re-query CCDS DB by GeneID:7739See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55528.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000449285.6 ENSP00000395228.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000449285.6Link to Ensembl Protein Viewer:ENSP00000395228.2Re-query CCDS DB by Nucleotide ID:ENST00000449285Re-query CCDS DB by Protein ID:ENSP00000395228
Original member Current member NCBI NM_001178108.2 NP_001171579.1 Accepted alive Link to Nucleotide Sequence:NM_001178108.2Link to Protein Sequence:NP_001171579.1Re-query CCDS DB by Nucleotide ID:NM_001178108Re-query CCDS DB by Protein ID:NP_001171579Link to BLAST:NP_001171579.1
Original member Current member NCBI NM_001388432.2 NP_001375361.1 Accepted alive Link to Nucleotide Sequence:NM_001388432.2Link to Protein Sequence:NP_001375361.1Re-query CCDS DB by Nucleotide ID:NM_001388432Re-query CCDS DB by Protein ID:NP_001375361Link to BLAST:NP_001375361.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171579.1 690 O15231-3 690 100% 0 0
NP_001375361.1 690 O15231-3 690 100% 0 0

Chromosomal Locations for CCDS 55528.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152914490 152914523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152914710 152914833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152915138 152915203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152917131 152917169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152917285 152917362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152918065 152918154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152918983 152919081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152920328 152920411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152920707 152920748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152922173 152922256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152922720 152922809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152928575 152928661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152931672 152931776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152932873 152932971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152938074 152938163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152945267 152945464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152959699 152959896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152963839 152963949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152965447 152965527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152967167 152967238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152969382 152969484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152970443 152970541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2073 nt):
ATGAGTATCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCCACCAGGCGAGGAGGAGCGCAATA
ACGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGATTACCAAGCAGGATGA
ATCGGAGGGTCGCACCATAGAGCTGCCCTCAGGCCGGAGTCGCGCCACATCCTTTTCATCAGCTGGGGAG
GTTCCGAAGCCTAGGCCTCCGAGCACAAGGGCTCCCACTGGCTACATCATCCGGGGAGTGTTCACCAAGC
CCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAG
TCTGGTGAGAACAGCTAACGCTGGTCCTCCCCGCCCCTCCTCCTCTGGCTACAAGATGACCACTGAGGAT
TACAAGAAGCTGGCACCCTACAATATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAGGAGGAGGAGG
AGGAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGTGTTCTGAGGAG
GACAGCTCCCCGGGAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGCAGTCCTACCCAGGAG
ACACAGGCACCGTTTATCGCGAAGAGGGTGGAGGTGGTGGAAGAGGACGGGCCTTCTGAGAAGAGCCAGG
ACCCACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTCG
GGCAATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCCGCTGGGAGCCAGGAGCTCAGCTCAAGAGGT
GAGGAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGTGGAAG
GCATGAGGTCTTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGC
TGGTGAGGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTGATGGCAAT
GTGGGATCCGGAGCCACGGGCTCCCGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCCGAGAGAGGAA
GCTCCAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGCAACAGCACAGCAGCCCAGGAGGA
TGCAAAGGCAGACCCAAAGGGGGCCTTGGCTGATTATGAGGGGAAGGATGTGGCCACCAGGGTCGGAGAG
GCCTGGCAGGAGAGGCCTGGAGCTCCAAGAGGTGGCCAAGGAGACCCAGCTGTACCCGCTCAGCAACCTG
CAGATCCCAGCACCCCAGAGCGGCAGAGCAGCCCCAGCGGATCTGAGCAACTTGTCAGACGAGAGAGTTG
TGGCAGCAGCGTGTTGACTGATTTTGAGGGGAAGGATGTGGCCACCAAGGTCGGAGAGGCCTGGCAGGAC
AGGCCTGGAGCCCCAAGAGGTGGCCAAGGAGACCCAGCTGTACCCACTCAGCAACCTGCAGATCCCAGTA
CCCCAGAACAGCAGAACAGCCCCAGCGGATCTGAGCAATTCGTCAGACGAGAGAGCTGCACCAGCAGGGT
GAGGAGCCCCTCGAGCTGCATGGTCACTGTTACTGTCACTGCCACATCTGAGCAGCCTCACATTTATATT
CCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACCACCAAAGGGATTCTCTTCGTGAAGGAGTACGTGA
ATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGCAACGTCAGCAGCATTGAGGACTC
ATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTGAGAGGACAACTGGAGGGATCTGT
ACTTACTGCAACCGTGAGATCCGAGACTGTCCAAAGATTACCCTAGAACATCTTGGTATCTGCTGCCATG
AATATTGCTTTAAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTCCTGGATCAGATCTTCATTCACCG
TGACACCATTCACTGTGGGAAATGCTATGAGAAGCTCTTCTAG

Translation (690 aa):
MSISALGGRTKGKPLPPGEEERNNVLKQMKVRTTLKGDKSWITKQDESEGRTIELPSGRSRATSFSSAGE
VPKPRPPSTRAPTGYIIRGVFTKPIDSSSQPQQQFPKANGTPKSAASLVRTANAGPPRPSSSGYKMTTED
YKKLAPYNIRRSSTSGDTEEEEEEEVVPFSSDEQKRRSEAASGVLRRTAPREHSYVLSAAKKSTGSPTQE
TQAPFIAKRVEVVEEDGPSEKSQDPPALARSTPGSNSADGGRTKASRAIWIECLPSMPSPAGSQELSSRG
EEIVRLQILTPRAGLRLVAPDVEGMRSSPGNKDKEAPCSRELQRDLAGEEAFRAPNTDAARSSAQLSDGN
VGSGATGSRPEGLAAVDIGSERGSSSATSVSAVPADRKSNSTAAQEDAKADPKGALADYEGKDVATRVGE
AWQERPGAPRGGQGDPAVPAQQPADPSTPERQSSPSGSEQLVRRESCGSSVLTDFEGKDVATKVGEAWQD
RPGAPRGGQGDPAVPTQQPADPSTPEQQNSPSGSEQFVRRESCTSRVRSPSSCMVTVTVTATSEQPHIYI
PAPASELDSSSTTKGILFVKEYVNASEVSSGKPVSARYSNVSSIEDSFAMEKKPPCGSTPYSERTTGGIC
TYCNREIRDCPKITLEHLGICCHEYCFKCGICSKPMGDLLDQIFIHRDTIHCGKCYEKLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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