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Report for CCDS51090.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51090.1 Public Mus musculus 3 Prkacb 23 108 98 CCDS HistoryNCBI Gene:18749Re-query CCDS DB by CCDS ID:51090.1Re-query CCDS DB by GeneID:18749See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51090.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106137.7 ENSMUSP00000101743.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106137.7Link to Ensembl Protein Viewer:ENSMUSP00000101743.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106137Re-query CCDS DB by Protein ID:ENSMUSP00000101743
Original member NCBI NM_001164198.1 NP_001157670.1 Updated not alive Link to Nucleotide Sequence:NM_001164198.1Link to Protein Sequence:NP_001157670.1Re-query CCDS DB by Nucleotide ID:NM_001164198Re-query CCDS DB by Protein ID:NP_001157670
Current member NCBI NM_001164198.2 NP_001157670.1 Accepted alive Link to Nucleotide Sequence:NM_001164198.2Link to Protein Sequence:NP_001157670.1Re-query CCDS DB by Nucleotide ID:NM_001164198Re-query CCDS DB by Protein ID:NP_001157670Link to BLAST:NP_001157670.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157670.1 338 P68181-2 338 100% 0 0

Chromosomal Locations for CCDS 51090.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 146732588 146732713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 146737934 146738098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 146745260 146745382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 146746600 146746695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 146747921 146748047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 146750483 146750565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 146751447 146751545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 146755632 146755760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 146757707 146757768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 146769934 146769940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1017 nt):
ATGAATGTGAAAGAGTTTCTAGCCAAAGCCAAAGAAGACTTTCTGAGGAAATGGGAGAACCCTCCCCCGA
GTAATGCTGGGCTTGAGGATTTTGAGAGGAAGAAAACCCTCGGGACGGGTTCCTTTGGAAGAGTCATGTT
GGTGAAGCATAAAGCCACTGAGCAGTACTACGCCATGAAGATCTTAGACAAGCAGAAGGTTGTTAAGCTG
AAGCAAATAGAGCACACTCTGAATGAGAAGAGAATCCTGCAGGCCGTGGAGTTCCCGTTCCTTGTGCGGC
TGGAGTACTCTTTTAAGGATAATTCTAATTTATACATGGTTATGGAATACGTCCCTGGGGGAGAGATGTT
CTCACATCTGAGAAGAATTGGAAGGTTCAGTGAGCCCCACGCCCGTTTCTATGCAGCCCAGATTGTGCTA
ACATTTGAGTACCTTCATTCCCTCGACCTCATCTACAGAGATCTCAAGCCGGAAAACCTCTTAATTGACC
ACCAGGGTTACATCCAGGTCACAGATTTCGGGTTCGCCAAAAGAGTCAAGGGCAGGACATGGACATTGTG
TGGCACCCCAGAGTACCTGGCCCCGGAGATCATCCTCAGCAAGGGTTACAATAAGGCGGTGGACTGGTGG
GCACTGGGCGTGCTGATCTATGAGATGGCTGCTGGCTACCCTCCATTCTTTGCTGACCAGCCAATTCAGA
TCTATGAGAAGATTGTCTCTGGAAAGGTCCGGTTCCCATCACACTTCAGCTCCGATCTCAAGGACCTTCT
GCGGAACCTGCTGCAGGTGGATCTGACAAAGCGATTCGGGAACCTGAAGAACGGCGTGAGTGACATAAAG
ACCCACAAGTGGTTTGCCACAACTGACTGGATTGCTATTTATCAGAGAAAGGTTGAGGCTCCATTCATAC
CAAAGTTCAGAGGCTCTGGCGATACCAGCAACTTCGATGACTATGAAGAAGAAGAAATCCGTGTGTCTAT
AACAGAAAAATGTGGAAAGGAATTTTGTGAATTTTAG

Translation (338 aa):
MNVKEFLAKAKEDFLRKWENPPPSNAGLEDFERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKL
KQIEHTLNEKRILQAVEFPFLVRLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL
TFEYLHSLDLIYRDLKPENLLIDHQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWW
ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIK
THKWFATTDWIAIYQRKVEAPFIPKFRGSGDTSNFDDYEEEEIRVSITEKCGKEFCEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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