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Report for CCDS49299.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49299.1 Public Mus musculus 13 Zfp759 23 108 98 CCDS HistoryNCBI Gene:268670Re-query CCDS DB by CCDS ID:49299.1Re-query CCDS DB by GeneID:268670See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 49299.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052716.7 ENSMUSP00000049650.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052716.7Link to Ensembl Protein Viewer:ENSMUSP00000049650.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000052716Re-query CCDS DB by Protein ID:ENSMUSP00000049650
Original member Current member NCBI NM_172392.3 NP_765980.3 Accepted alive Link to Nucleotide Sequence:NM_172392.3Link to Protein Sequence:NP_765980.3Re-query CCDS DB by Nucleotide ID:NM_172392Re-query CCDS DB by Protein ID:NP_765980Link to BLAST:NP_765980.3

Chromosomal Locations for CCDS 49299.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67128309 67128314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67136718 67136844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67137310 67137405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67138616 67140552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2166 nt):
ATGGAGAATATGCTGTCATTCTGGGATGTGGTAATATATTTCTCTGCAGAGGAGAGGGAATACCTGGGTC
CTCCTCAGTGGAAATTGTACAGGGATGTGATGCTGGAGAATTACAACAACCTTGTCTTTCTAGGTCTTGC
TTCCTCTAAGCCATACCTGGTCAGATTTCTGGAGCAAATACAAGAGCCTCTAGATGTGAAGAGTCAAGTG
GCCATCTCTATGTACTCAGGGGGAAATAGCTCTACATGCAAAGAAGTTTCTGAGAGGGAAAAAGTACTTG
GAAATCAGCAGATAATTCATTTAGGTTTGAAGCCATATAGTTGTGAAGAGGTTGGCAAGTCCTTTTGTTT
TTCATCATTACTTTCTGAACACAAAAGAATCCATACAGGAGAAAAACCCTACAAGTATGAAACATGTAGC
AAGGCCTTCCATGTTCCATCAAAACTTTCTCAACACAAGATAATTCGCACAGGAGAAAAACCCTACAACT
GTGAAGTATGTGCCAAGGCCTTCAAATATCCATCAAGACTTTCAAAACATAAGATAATTCATAAAGGTGA
GAAGCCATACAAATGTAAAGTATGTGGAAAGGCCTTCTTCTCTCCATCATCTATTTGTCAACACGAGAGA
ATTCATACAGGAGAGTTACCCTGCAAGTGTGATGTATGTGGCAAGGCTTTCCAATATCCATCATTACTTT
CAAAACACAAGATAATTCATACAGAACAAAAACCCTACAAGTGTGAAGTATGTGGAAATTTCCTCCGCTC
TCGATCATCACTTCATGAACACAAGAGAATGCATGCAGGAGAGAAACCCTACAAGTGTGAAGTATGTGGC
AAGGCCTTTGAATATCCATCAAGACTTTCAAAACATAAGAATATTCATACAGGAGAGACACCATACAAGT
GTAAAGTATGTGGAAAGGCTTTCCGCTCTCCATCATCACTTCGTGTACACAAGGGAATTCATAGAGAAGA
CAAACCCTACAAGTGTGAAGTATGTGGCAAGGCCTTCCGTTATTCATCAGTACTTTCAGACCATAAGAAT
ATTCATACAGGAGAGACACCATACAAGTGTAAAGTGTGTGGAAAGGCCTTTCGCTCTCCATCATCACTTC
GTGTACACAAGGGAACTCACAGAGGAGGAAAACCCTACAAGTGTGAAGTATGTGGCAAGGCCTTCCATTA
TCCATCAATACTTTCCAACCATAAGAATATACATACAGGAGAGACACCATACAAGTGTAAAGTATGTGGA
AAGGCCTTCCACTCTCCATCATCACTTATTCTACACAAGGGAACTCATAGAGAAGACAAACCCTATAAGT
GTGAAGTGTGTGGCAAGGCCTTCCGTTATCCATCAATACTTTCCAACCATAAGAAAATTCATAGAGAACA
AAAACCCTCCAAGTGTAAAGTAGGTAGAAAGGTCTTCTGGTCTCCATCATCACTTCCTGAGCAGAAAAGA
ATTCATACAAGAGAGAAACCCTACAACTGTGAAATATGTGGCAAGGCCTTCAAATATCCATCAAGACTTT
TAAAACATAAGATAATTCATACAAGAGAGAAACAATACAAGTGTAAAGTGTGTGGAAATGCCTTCTGCAC
TCCATCTTCACTTTGGCAACACAAGAGAATTCATACAGGAGAGTTACCCTGCAAGTGTGATGTATGTGGC
AAGACCTTCCGCTTTCCATCATTACTTTTAAAACACAAGATAAGTCATACAGACCAAAAACCCTACAAGT
GTAAAATATGTGGAAATTTCCTTCGCTCTCAATCATCACTTCATGAACACAAGAGAATGCATGCAGGGGA
GAAACCCTACAAGTGTGAAATATGTGGCAAGGCCTTTGAATATCCATCAAGACTTTCAAAACATAATAAC
ATACATACAGGAGAGACACCATACAAGTGTAAAGTGTGTGGAAAGGCTTTCCGCTCTCCATCATCACTTC
GTGTACACAAGGGAATTCATAGAGAAGATAAACCCTTCAAGTGTGAAGTATGTGGCAAGGCCTTCCGTTA
TTCATCAGTACTTTCTGACCATAAGAATATTCATACAGGAGAGACACCATACAAGTGTAAAGTGTGTGGA
AAGGCCTTCCGCACTACATCATCACTTCATATACACAAGGGAATACATAGAGAAGACAACCCCTAA

Translation (721 aa):
MENMLSFWDVVIYFSAEEREYLGPPQWKLYRDVMLENYNNLVFLGLASSKPYLVRFLEQIQEPLDVKSQV
AISMYSGGNSSTCKEVSEREKVLGNQQIIHLGLKPYSCEEVGKSFCFSSLLSEHKRIHTGEKPYKYETCS
KAFHVPSKLSQHKIIRTGEKPYNCEVCAKAFKYPSRLSKHKIIHKGEKPYKCKVCGKAFFSPSSICQHER
IHTGELPCKCDVCGKAFQYPSLLSKHKIIHTEQKPYKCEVCGNFLRSRSSLHEHKRMHAGEKPYKCEVCG
KAFEYPSRLSKHKNIHTGETPYKCKVCGKAFRSPSSLRVHKGIHREDKPYKCEVCGKAFRYSSVLSDHKN
IHTGETPYKCKVCGKAFRSPSSLRVHKGTHRGGKPYKCEVCGKAFHYPSILSNHKNIHTGETPYKCKVCG
KAFHSPSSLILHKGTHREDKPYKCEVCGKAFRYPSILSNHKKIHREQKPSKCKVGRKVFWSPSSLPEQKR
IHTREKPYNCEICGKAFKYPSRLLKHKIIHTREKQYKCKVCGNAFCTPSSLWQHKRIHTGELPCKCDVCG
KTFRFPSLLLKHKISHTDQKPYKCKICGNFLRSQSSLHEHKRMHAGEKPYKCEICGKAFEYPSRLSKHNN
IHTGETPYKCKVCGKAFRSPSSLRVHKGIHREDKPFKCEVCGKAFRYSSVLSDHKNIHTGETPYKCKVCG
KAFRTTSSLHIHKGIHREDNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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