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Report for CCDS46132.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46132.1 Public Homo sapiens 19 MEIS3 24 110 108 CCDS HistoryNCBI Gene:56917Re-query CCDS DB by CCDS ID:46132.1Re-query CCDS DB by GeneID:56917See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46132.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000441740.6 ENSP00000388667.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000441740.6Link to Ensembl Protein Viewer:ENSP00000388667.2Re-query CCDS DB by Nucleotide ID:ENST00000441740Re-query CCDS DB by Protein ID:ENSP00000388667
Original member Current member NCBI NM_001009813.3 NP_001009813.1 Accepted alive Link to Nucleotide Sequence:NM_001009813.3Link to Protein Sequence:NP_001009813.1Re-query CCDS DB by Nucleotide ID:NM_001009813Re-query CCDS DB by Protein ID:NP_001009813Link to BLAST:NP_001009813.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001009813.1 358 Q99687-3 358 100% 0 0

Chromosomal Locations for CCDS 46132.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 47406477 47406526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47406888 47406971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47407079 47407137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47407352 47407428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47409099 47409247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47409436 47409547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47414717 47414815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47415051 47415101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47416652 47416702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47416804 47416963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47417178 47417350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47419070 47419081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1077 nt):
ATGGCCCGGAGGTATGATGAGCTGCCGCACTACCCAGGCATCGTGGATGGCCCCGCAGCCCTGGCTAGCT
TCCCAGAGACAGTGCCCGCAGTACCAGGGCCCTATGGCCCGCACCGGCCTCCCCAGCCCCTGCCCCCAGG
CTTGGACAGCGACGGCCTGAAGAGGGAGAAGGATGAGATCTATGGACACCCGCTCTTCCCCCTCTTGGCC
CTGGTCTTTGAGAAATGTGAACTGGCTACATGCTCTCCCCGTGACGGGGCCGGAGCTGGGCTGGGGACAC
CCCCTGGAGGTGACGTCTGCTCCTCTGATTCCTTCAACGAGGACATCGCTGCCTTTGCCAAGCAGGTTCG
CTCTGAGAGGCCCCTCTTCTCCTCCAACCCAGAACTGGACAATCTGATGATCCAGGCCATCCAGGTGCTG
CGGTTCCACCTGCTGGAGCTGGAGAAGGGAAAGATGCCCATCGACCTGGTCATCGAGGATCGGGACGGCG
GCTGCAGGGAGGACTTCGAGGACTACCCAGCCTCCTGCCCCAGCCTCCCAGACCAGAATAATATGTGGAT
TCGAGACCATGAGGATAGTGGGTCTGTACATTTGGGGACCCCAGGTCCATCCAGTGGGGGCCTGGCCTCC
CAGAGTGGGGACAACTCCAGTGACCAAGGAGACGGGCTGGACACCAGCGTGGCCTCTCCCAGTTCTGGTG
GAGAAGATGAGGACTTGGACCAGGAGCGACGGCGAAACAAGAAGAGGGGGATCTTCCCCAAGGTGGCCAC
CAACATCATGCGAGCCTGGTTGTTCCAGCACCTCTCGCACCCGTACCCCTCGGAGGAGCAGAAGAAACAG
CTGGCGCAGGACACGGGGCTCACCATCCTGCAAGTCAACAACTGGTTCATTAACGCCCGGAGACGCATCG
TGCAACCTATGATCGATCAATCCAACCGCACAGGGCAGGGTGCAGCCTTCAGCCCAGAGGGCCAGCCCAT
CGGGGGCTATACCGAGACGCAGCCACACGTGGCCGTCCGGCCTCCGGGATCAGTGGGGATGAGTTTGAAC
TTGGAAGGAGAATGGCATTATCTATAG

Translation (358 aa):
MARRYDELPHYPGIVDGPAALASFPETVPAVPGPYGPHRPPQPLPPGLDSDGLKREKDEIYGHPLFPLLA
LVFEKCELATCSPRDGAGAGLGTPPGGDVCSSDSFNEDIAAFAKQVRSERPLFSSNPELDNLMIQAIQVL
RFHLLELEKGKMPIDLVIEDRDGGCREDFEDYPASCPSLPDQNNMWIRDHEDSGSVHLGTPGPSSGGLAS
QSGDNSSDQGDGLDTSVASPSSGGEDEDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQ
LAQDTGLTILQVNNWFINARRRIVQPMIDQSNRTGQGAAFSPEGQPIGGYTETQPHVAVRPPGSVGMSLN
LEGEWHYL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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