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Report for CCDS45626.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45626.1 Public Homo sapiens 17 EVPLL 24 110 108 CCDS HistoryNCBI Gene:645027Re-query CCDS DB by CCDS ID:45626.1Re-query CCDS DB by GeneID:645027See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45626.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399134.5 ENSP00000382086.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399134.5Link to Ensembl Protein Viewer:ENSP00000382086.4Re-query CCDS DB by Nucleotide ID:ENST00000399134Re-query CCDS DB by Protein ID:ENSP00000382086
Original member Current member NCBI NM_001145127.2 NP_001138599.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145127.2Link to Protein Sequence:NP_001138599.1Re-query CCDS DB by Nucleotide ID:NM_001145127Re-query CCDS DB by Protein ID:NP_001138599Link to BLAST:NP_001138599.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138599.1 301 A8MZ36 301 100% 0 0

Chromosomal Locations for CCDS 45626.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 18380938 18381000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18381367 18381521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18381603 18381730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18382513 18382638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18382826 18382864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18383025 18383185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18383271 18383378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18383492 18383587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18388219 18388248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGCAAGCCAGCGCCGACCAGGTGGAGCGGGACATCCTGGAGACGCAGAAGAGGCTGCAGCAGGACCGGC
TGAACAGTGAGCAGAGCCAGGCCCTGCAGCACCAGCAGGAGACGGGCAGCAGCCTGAAGGAGGCCGAGGT
GCTGCTCAAGGACCTCTTCCTGGACGTGGACAAGGCCCGGCGGCTCAAGCACCCGCAGGCTGAGGAGACT
GAGAAGGACATCGAGCAGCTGCACGAGCGGGTGACCCAGGAGTGTGCGGAGTACTGTGCCCTGTACGAGA
AGATGGTGCTGCCGCCCCGACGTGGGATCCAAGGTCGACTGGGCACACGTGCTGGAGCAGAAACAGAAGC
TGGTCTGCGCAGGCCAGTATGGGCCGGGCATGGCGGAGCTGGAGGAACAGATCGCGGAGCTCAACATCGT
GCAGAAGGAGATCAACGACCAAGGAGAGCAGCTGCGGAGCCTGGTGGGGCCGGATGCCGCCACCATCCGG
AGCCAATACCGAGACCTACTGAGGGCGGCGTCGTGGCGCGGGCAGAGCCTGGGCAGCCTGTACACGCACT
GCAGGGCTGCACGTGGCAGCTGAGCGCCCTGGCGGAGCAGCAGCGCCGCATCCTGCAGCAGGACTGGAGC
GACCTCATGGCCGACCCTGCGGGCGTGCGGCGGGAATACGAGCACTTCAAGCAGCACGAGCTGCTGAGCC
AGGAGCAGAGCGTAAACCAGCTGGAGGAGGACGGCAAGCGCATGGTGGAGCTGCGGCACCCCGCGGTGGG
GCCCATCCAGGCCCACCAGGAGGCCCTGAAGATGGAGTGGCAGAACTTCCTGAACCTGTGCATCTGCCAG
GAGACCCAGCTCCAGCACGTGGAGGACTACAGCCGGATTCTGTGTCCATCTTCCTCTCCTCATTGA

Translation (301 aa):
MQASADQVERDILETQKRLQQDRLNSEQSQALQHQQETGSSLKEAEVLLKDLFLDVDKARRLKHPQAEET
EKDIEQLHERVTQECAEYCALYEKMVLPPRRGIQGRLGTRAGAETEAGLRRPVWAGHGGAGGTDRGAQHR
AEGDQRPRRAAAEPGGAGCRHHPEPIPRPTEGGVVARAEPGQPVHALQGCTWQLSALAEQQRRILQQDWS
DLMADPAGVRREYEHFKQHELLSQEQSVNQLEEDGKRMVELRHPAVGPIQAHQEALKMEWQNFLNLCICQ
ETQLQHVEDYSRILCPSSSPH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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