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Report for CCDS44636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44636.1 Public Homo sapiens 11 ZFTA 24 110 108 CCDS HistoryNCBI Gene:65998Re-query CCDS DB by CCDS ID:44636.1Re-query CCDS DB by GeneID:65998See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 44636.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000433688.2 ENSP00000482180.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000433688.2Link to Ensembl Protein Viewer:ENSP00000482180.1Re-query CCDS DB by Nucleotide ID:ENST00000433688Re-query CCDS DB by Protein ID:ENSP00000482180
Original member Current member NCBI NM_001144936.2 NP_001138408.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001144936.2Link to Protein Sequence:NP_001138408.1Re-query CCDS DB by Nucleotide ID:NM_001144936Re-query CCDS DB by Protein ID:NP_001138408Link to BLAST:NP_001138408.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138408.1 678 C9JLR9 678 100% 0 0

Chromosomal Locations for CCDS 44636.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 63763418 63763869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63764038 63764598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63764868 63765254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63765807 63766304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63768484 63768622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2037 nt):
ATGGAGCCCGGCGGGGACCACCGGAGCCGGAGCAGCGGCGGCAGGGGCGGCCCCGGGCCAGCAGTGGCCT
CGGCACGGGGCCGACGGCTGCCGCCCGCCGGATCGAGCGGCAGCGCGGAGCCAGAGGAAGACGAAGGCGG
GCAAGATCTTCAGCTGGAAGGGGGTGCCTTGGGGTCCTGGGGGAGTGCCCCCCTGCCCTCCTCCAGGGCC
AGGGGACCAGCATCTTCAGGCAGGAAATATTCAGACCACTGTGAGGCCCGGGCCTCGAGGCCTGGAAAGA
GCCGCATCCCTGGCCGTGACCACCGGCGCTACTACCACGACCACTGGCGGCTGGAGTACCTGATGGACTT
CAACCCTGCCCGGCACGGCATGGTGTGCATGGTGTGCGGCAGCTCCCTGGCCACCCTCAAGCTCAGCACC
ATCAAGCGCCACATCCGCCAAAAGCACCCCTACTCCTTGCATTGGAGTCCCCGGGAGAAGGAAGTCATCA
GCAACAGCTGGGATGCACACCTGGGGCTGGGGGCCTGCGGAGAGGCCGAGGGCCTGGGGGTCCAGGGGGC
TGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAGGAGGGGGCCGGTGTCCCAGCTTGCCCGCCCAAG
GGCCCAGGCAAAGCCCCAGCTGGTGGGGGCTGCCGGCGCCAGCGGCGAGGGGGCCCAGTGGCACCCCGGG
CTCGGCGTCTGCGCCTCTCAGCCTCCCGGAGGGCCGGGGGCAGCAGGGGGCTGGGGGCCCGGCGCCTGGA
GAGGAGGCTGAAGGAGTCCCTGCAGAACTGGTTCCGGGCCGAGTGTCTCATGGACTATGACCCGCGGGGG
AACCGGCTGGTGTGCATGGCCTGTGGCCGGGCACTGCCCAGCCTGCACCTGGACGACATCCGTGCCCACG
TGCTGGAGGTGCACCCTGGCTCCCTGGGGCTCAGCGGCCCCCAGCGCAGTGCCCTGCTGCAGGCCTGGGG
GGGCCAGCCCGAGGCGCTGTCTGAGCTCACCCAGTCCCCACCAGGCGATGACCTCGCCCCCCAGGACCTG
ACCGGAAAGAGCCGGGACTCGGCCTCCGCTGCTGGAGCCCCCTCCTCTCAGGATCTCAGCCCCCCAGACG
TAAAGGAAGAGGCTGGCTGGGTCCCTGAGAGGCCCGGGCCCGCAGAGGAGGAGGAGGAGCTGGAGGAGGG
CGAGGGCGAGAGGGCGGGGGTCCCGGGCCGGTCGCCGCGGGGCCGCGCCCACCGCCGCCACCCCCAGGAG
CGCTGGCGGCTGGAGTACCTCATGGAGTTGGACGGCGGCCGGCGCGGCCTGGTGTGCGGGGTGTGCGGGG
GCGCGCTGGCCTCGCTCAAGATGAGCACCATCGAGCGCCACATCCGCCGGCGCCACCCGGGCTCCACGCG
CCTCGGCGGGCCTGTCCAGGCCCTCATCGCCCGGGAGTGGAGCGAGAAGGCCGCCCACCTGCTGGCCCTG
GGGCCGCCCCGCCCCGAGTCCCCCCAGGGCCCCATCCCCCCCGGCACTGCCGCAGCCTCCGACGAGGGGG
GAGGGGACGAGGAGGAGGAGCCAGAGGAGGAGGAGGAGGAGTGGGGCGACGTTCCGCTGTCCCCTGGAGC
TCCCTTGGAGCGGCCCGCCGAAGAAGAGGAGGACGAAGAGGACGGCCAGGAGCCTGGGGGACTCGCCTTG
CCGCCGCCGCCTCCTCCCCCGCCTCCGCCCCCGCCCCGCAGCCGGGAGCAGCGGCGGAACTACCAGCCGC
GGTGGCGGGGCGAGTACCTGATGGACTACGACGGCAGCCGGCGCGGCCTGGTGTGTATGGTGTGCGGGGG
CGCGCTGGCCACGCTCAAGGTGAGCACCATCAAGCGCCACATCCTGCAGGTGCACCCCTTCTCCATGGAC
TTCACGCCTGAGGAGCGCCAGACTATCCTGGAGGCCTACGAGGAGGCGGCGCTGCGCTGCTACGGCCACG
AGGGCTTCGGGCCGCCCGCCCCGGCGCCGCGTGACGGCGGCGCGGACCTCAAGTCTGGCGCTGTGTGTCG
GGCGTAG

Translation (678 aa):
MEPGGDHRSRSSGGRGGPGPAVASARGRRLPPAGSSGSAEPEEDEGGQDLQLEGGALGSWGSAPLPSSRA
RGPASSGRKYSDHCEARASRPGKSRIPGRDHRRYYHDHWRLEYLMDFNPARHGMVCMVCGSSLATLKLST
IKRHIRQKHPYSLHWSPREKEVISNSWDAHLGLGACGEAEGLGVQGAEEEEEEEEEEEEEGAGVPACPPK
GPGKAPAGGGCRRQRRGGPVAPRARRLRLSASRRAGGSRGLGARRLERRLKESLQNWFRAECLMDYDPRG
NRLVCMACGRALPSLHLDDIRAHVLEVHPGSLGLSGPQRSALLQAWGGQPEALSELTQSPPGDDLAPQDL
TGKSRDSASAAGAPSSQDLSPPDVKEEAGWVPERPGPAEEEEELEEGEGERAGVPGRSPRGRAHRRHPQE
RWRLEYLMELDGGRRGLVCGVCGGALASLKMSTIERHIRRRHPGSTRLGGPVQALIAREWSEKAAHLLAL
GPPRPESPQGPIPPGTAAASDEGGGDEEEEPEEEEEEWGDVPLSPGAPLERPAEEEEDEEDGQEPGGLAL
PPPPPPPPPPPPRSREQRRNYQPRWRGEYLMDYDGSRRGLVCMVCGGALATLKVSTIKRHILQVHPFSMD
FTPEERQTILEAYEEAALRCYGHEGFGPPAPAPRDGGADLKSGAVCRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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