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Report for CCDS39846.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
39846.1 Public Mus musculus 7 Cyp2b23 23 108 98 CCDS HistoryNCBI Gene:243881Re-query CCDS DB by CCDS ID:39846.1Re-query CCDS DB by GeneID:243881See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 39846.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077356.6 ENSMUSP00000076578.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077356.6Link to Ensembl Protein Viewer:ENSMUSP00000076578.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000077356Re-query CCDS DB by Protein ID:ENSMUSP00000076578
Original member Current member NCBI NM_001081148.1 NP_001074617.1 Accepted alive Link to Nucleotide Sequence:NM_001081148.1Link to Protein Sequence:NP_001074617.1Re-query CCDS DB by Nucleotide ID:NM_001081148Re-query CCDS DB by Protein ID:NP_001074617Link to BLAST:NP_001074617.1

Chromosomal Locations for CCDS 39846.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 26665933 26666114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26672725 26672866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26673037 26673224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26674356 26674497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26674996 26675172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26679393 26679553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26681315 26681464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26681597 26681759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26686260 26686430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1476 nt):
ATGGAGCCCAGTGTCTTGCTCCTCCTTGCTCTCCTCACAGGCTTCTTGCTACTCTTGATTAGAGGCCAGC
CAAAGGCATATAGCCGTCTTCCACCAGGACCCCGTCCCCTGCCCTTCTTGGGAAACCTCTTGCAGATGGA
CAGAGGAGGCCTCCTCAAGTCTTTTATTAAGCTTCGTGACAAACATGGCGATGTGTTCACAGTACACTTG
GGACCAAGGCCCGTGGTCATGCTGTATGGGACAGAGACCATAAAGGAAGCTCTGGTGGACCATAGTGATG
CTTTCTCTGGCCGGGGAGCAATTGCAGTGATTCAGCCAATTGTACAGGACTATGGTGTGATCTTTTCCAG
TGGGGAACGTTGGAAGACCCTTCGGCGATTCTCTCTGGCCACCATGAGAGACTTTGGGATGGGAAAGCGG
AGTGTGGAGGAGCGGATAAAGGAAGAGGCCCAATGTTTGGTGGAGGAACTAAAGAAATACGAGGGAGCCC
CCCTGGATCCCACCTTTCTCTTCCAGTGCATCACAGCCAATATCATCTGCTCCATTGTGTTTGGAGAGCG
CTTTGACTACACAGATCACCAGTTCCTGCACCTGCTTGATCTGTTCTATCAGACCTTGTCACTTATCAGC
TCATTCTCCAGTCAGTTGTTTGAACTCTTCTCTGCAGTCCTGAAGTACTTTCCTGGCACTCACAGACAAA
TTTCCAAAAACATACAGGAAATCCTCAACTACATTGGCCATAGTGTGGAGCAGCACAAGGCCACCTTGGA
CCCCAGTGCTCCACGAGACTTCATTGATACCTACCTTTTGCGCATGGAGAAGGAGAAGTCCAACCATCAC
ACAGAATTCCATCACCAGAACCTTTTGATATCTGTGCTCTCTCTCTTCTTTGCTGGCACTGAGACCACCA
GTACCACACTCCGCTATGGCTTCCTGCTTATGCTCAAGTACCCTCATGTTGCAGAGAAAGTCCAAAAGGA
GATTGATCAGGTGATCAGTGCACACCATGTCCCAACCCTTGAAGACCGAATCAAAATGCCATACACTGAG
GCGGTCATCCATGAGATTCAGAGATTTTCAGATCTCGCCCCGATTGGTCTGCCACACACAGTCACCAAAG
ACACAGTGTTCCGAGGATACCTGCTCCCCAAGAACACTGAGGTGTACCCCATCCTGAGTTCAGCTCTCCA
TGACCCACAGTACTTTGAACAACCAGACAAGTTCAATCCTGAGCACTTCCTGGATGCCAATGGGGCACTG
AAGAAAAGTGAAGCTTTTCTGCCCTTCTCCACAGGAAAGCGCATTTGTCTTGGCGAAGGCATTGCCCGAA
ACGAATTGTTCCTTTTCTTCACTGCCCTCCTTCAGAACTTCTCATTGTCCAGCCCCGTGGCTCCTGAAGA
CATTGACCTGACTCCCAAGGAGAGTGGCTTTGTCAAAATACCCCCAGTGTATCGGATCTGCTTCTTACCT
CGCTGA

Translation (491 aa):
MEPSVLLLLALLTGFLLLLIRGQPKAYSRLPPGPRPLPFLGNLLQMDRGGLLKSFIKLRDKHGDVFTVHL
GPRPVVMLYGTETIKEALVDHSDAFSGRGAIAVIQPIVQDYGVIFSSGERWKTLRRFSLATMRDFGMGKR
SVEERIKEEAQCLVEELKKYEGAPLDPTFLFQCITANIICSIVFGERFDYTDHQFLHLLDLFYQTLSLIS
SFSSQLFELFSAVLKYFPGTHRQISKNIQEILNYIGHSVEQHKATLDPSAPRDFIDTYLLRMEKEKSNHH
TEFHHQNLLISVLSLFFAGTETTSTTLRYGFLLMLKYPHVAEKVQKEIDQVISAHHVPTLEDRIKMPYTE
AVIHEIQRFSDLAPIGLPHTVTKDTVFRGYLLPKNTEVYPILSSALHDPQYFEQPDKFNPEHFLDANGAL
KKSEAFLPFSTGKRICLGEGIARNELFLFFTALLQNFSLSSPVAPEDIDLTPKESGFVKIPPVYRICFLP
R


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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