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Report for CCDS37944.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37944.1 Public Mus musculus 19 Kank1 23 108 98 CCDS HistoryNCBI Gene:107351Re-query CCDS DB by CCDS ID:37944.1Re-query CCDS DB by GeneID:107351See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37944.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049400.14 ENSMUSP00000042177.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049400.14Link to Ensembl Protein Viewer:ENSMUSP00000042177.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000049400Re-query CCDS DB by Protein ID:ENSMUSP00000042177
Original member NCBI NM_181404.6 NP_852069.4 Updated not alive Link to Nucleotide Sequence:NM_181404.6Link to Protein Sequence:NP_852069.4Re-query CCDS DB by Nucleotide ID:NM_181404Re-query CCDS DB by Protein ID:NP_852069
Current member NCBI NM_181404.7 NP_852069.4 Accepted alive Link to Nucleotide Sequence:NM_181404.7Link to Protein Sequence:NP_852069.4Re-query CCDS DB by Nucleotide ID:NM_181404Re-query CCDS DB by Protein ID:NP_852069Link to BLAST:NP_852069.4

Chromosomal Locations for CCDS 37944.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 25378494 25378530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25409086 25411764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25422144 25422341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25422919 25423027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25424138 25424383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25425897 25425984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25427977 25428196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25430221 25430363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25430879 25431079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25432865 25432963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 25433521 25433583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4083 nt):
ATGGCTTATACCACAAAAGTTAATGGCTGTGCTGCAGAAAAAGCAGACGGAGTTCTGAATGGAGACCATA
ACAAGGAAAAGAAAGACCCGTATTTTGTGGAAACCCCTTACGGTTTTCAGCTAGACTTAGATTTCGTCAA
ATACGTGGATGACATACAAAAGGGAAATACTATCAAGAAACTGAACATCCAGAAGAGGCGAAAGCCATCT
GTGCCATGTCCAGAAGTCAGGGCCATACCTGGTCATCAAGGTGTGTGGACTTCCACTGAGTCTCTGTCAT
CCTCCAACAGTGATGACAGCAAGCAGTGTCCCAGCTTCCTGCTAGCCAGAAGCCACGTTACTTCAACCCC
AATCCCACGGCCACCTGCCCCGCTAGAGACCTCACCCACTTTTGCTGTGTCAGAAAACCGACAGCTGCTG
CCCCCTCCCTCACCACAACTCCCCAGGCACAACCTCCATGTCACCAAGACGTTGATGGAGACCCGGAGAA
GACTGGAACAGGAGCGAGTCACCATGCAGATGGCACCGGGTGACTTCAGGAGGCCCAGGCTGGCCAGTTT
TGGAGGCATGGGCTCCACAAGCTCCCTCCCGTCCTTTGTGGGGTCTGCTAACCACAGTTCTGCAATACAC
CAGCTTCAGAATGGCTACCAAGGCAATGGGGATTATAACAGCTACGTCCCAGCAGCTCCTACCACGTCTT
CCATGGGAAGCTCCGTCCGGCACAGCCCATTGAGTTCAGGGATCTCCACCCCAGTGACCAACGTGAGCCC
CATGCACCTGCAGCACATCCGAGAGCAGATGGCCATCGCCTTAAAACGCCTGAAGGAGCTTGAGGAGCAG
GTGAGGACCATCCCTGTGCTCCAGGTCAAGATCTCCGTCTTGCAAGAAGAGAAAAGGCAGTTGGCCTCGC
AGCTGAAAAGCCAGAGGGCCTCGTCCCAGAACGAAGCGTGCGGTGTGAGGAAACGCTCCTACAGTGCGGG
CAACGCCTCCCAGCTGGAACTGCTTGCCCGAGCCCGAAGAGGCGGCGGGGAATTGTACATCGACTACGAG
GAGGAAGAGATGGAGAGCGTAGAGCAGAGCACGCAGCGGATCCAGGAGTTCCGACAGCTCACGGCCGACA
TGCAGGCGCTGGAGCGGAAGATTCAGGATAGCAGCTGCGAGGTGGCATCAGAGCTCAGGGAGAATGGGCA
GTGCCCGTCTCGGGAGTGCAAGTCTGTGGCCGTGGGTAGTGATGAGAACATGAACGATGTCGTTGTATAC
CACAGAGACTTAAGGCCCTGCAAGGATACGGCTGTGGGGACGGTCACCGAGACGAGGAATGTTGGCATCA
GCGTGACAGAAGCTATGCTTGGGGTTATCACTGAAGCTGACAAAGAGATTGAGCTGCAGCAGCAGACCAT
AGAGGCCTTGAAGGAGAAGATTTACCGCCTAGAAGTACAGCTTAAAGAAACCACCCATGACCGCGAGATG
ACTAAGCTCAAGCAAGAACTACAGGCTGCCGGATCCAGGAAGAAAGTTGACAAGGCCACAATGGCCCAGC
CACTTGTCTTCAGCAAGTTGGTGGAGGCACTGGTGCCAACCAGAGATCAAATGGTTGGCAGTCATGTGGA
CACAAGGGAGTCATGTGTTGGGACCTCTGTGCAAACTAGTAGCGTAGGCACCTCCTGCCATCCTGACTGC
AAGAACCAAGTCGTGGGATCCGAGCTGCCCATGAATTGGTGGGTCGTGAAGGAGAGGGTGGCAATGCATG
ACCAATGCGTAGGGAGGTCTGTTGAGACTTGTGACCGGAGTGTGGGTGTGGAAGTCAGTGTCTGTGAAAC
AGGCAGCAACACAGAGGCTTCTGGGAGCGACCTGACACTCCTTAAGACAAACTTGAACCTCAAAGACGTG
CGGTCCATCGGCTGTGGAGATTGTTCCGTGGATGTGATTGTCTGCTTCCCCAAGGAGTGCACCTCCCGAA
GCATGAACACGGAGGCTGTAGGCCAGGAGGAAGCAGCTGTCATGGCGGTGCCCCATACCACAGACCAGCA
CACCAGCACGAATCTGGAGCGGGTGGACCAGTGCACTAACACAGAGGCAGCCACCCTGGTGGAGTCCTGC
ACCAACACTCTCCTCAGCACTATGGACAAGCAGACCAGCACCCAGACTGTGGAGATGCGAACGGTGGCCA
TCGGAGAAGGCCGCGTCAGAGACATCAACCCCTCCACTAAGACTCGGTCCGTTGGTGTCGGGACAGTGCT
GTCTGGCAATTCTGAGTTTGACAGGCCATGTGCTGTGAAGACCAAAGAGTCGGGTGTGGGACAGATAAAT
ATTCAGGACAACTATCTAGTTGGTCTCAAAATGCGGACCATAGCGTGCGGGCCTCCACAGTTGACTGTGG
GGCTGATGGGCAGCAGGAGGAGCGTGGGTGTTGGGAACGAGCCCGTAGGAGAGCTCCCGGAGGAGTCTCC
TCAGCCTCGGGTGGCGTCTGGAATGGTGACTGGCTTGGATCACTACATTGAGCGCGTGCAGAGGCTGCTG
GCAGAGCAACAGACGTTGCTGGCTGAGAACTACAGTGAGCTGGCGGAGGCTTTTGGGGAGCCTCATTCAC
AGATTGGCTCCCTCAACTCGCAGCTCATCAGCACCCTGTCGTCCATCAATTCCGTCATGAAGTCTGCAAG
CACCGAGGAGCTCAGGAACTCTGACTTCCAGAAAGCCAGTCTGGGTAAAACTACAGGAAATCACTTGGAA
TATACCTGCAAGTGTGGAGGCCTTCGGTCAGGAGGACTGTTAAATGTACAACCATCCCAGCCTGAGGTGG
AGGCGGAGACTGCAGAAGGCAAGCACAGCCGGGGCCATGAGCAGTTCCCCATGCAAGGAAGTACCCTGCC
CCCGGTGAACCTGACAGATGACCAGATAGCCACTGGCCTCTACGTATGTCCAAATAATGAAAACACACTG
AAGTCCATCATGAAGAAAAGTGATGGGAATAAAGATTCAAATGGAGCCAAAAAGAATCTTCAGTTCATTG
GCATTAACGGCGGGTATGAGACAACTTCAAGTGACGAATCCAGCTCGGATGGAAGCTCTTCTTCCGAGTC
AGATGACGAGTGTGACACCATTGGGTACCCTCCCGAGGAAGAGGAGGAGGAGGAAGAGAAGGACCACGAC
ACTCGGGGAATGGCGGAAGGGCACCACGCAGTTAATATTGAAGGTTTCAAGTCTGCCAGGGTGGAAGATG
AAGTGCAGGTTCCAGAATGTGAGCCTGAGAAGGAGGAAATCAGAGAGAGGTATGAACTAAGTGAAAAGAT
GTTGTCAGCCTGCAACTTACTGAAATACAACATAAAGGATCCCAAAGCTTTGGCCAGCAAAGATATGAGG
ATCTGTCTGAACACCCTCCAGCACGATTGGTTCCGAGTGTCCAGTCAGAAGTCCGCCGTGCCAGCCATGG
TGGGCGACTACATCGCCGCGTTCGAGGCTGTCTCCCCGGACGTGCTCCGGTACATCATCAACATGGCGGA
CGGCAATGGCAACACTGCCCTCCACTACAGCGTGTCCCACTCCAACTTCCAGATCGTCAAGCTGCTTCTG
GATGCAGACGTGTGCAATGTGGATCACCAGAACAAGGCAGGGTACACACCCATCATGCTGGCAGCCCTCG
CGGCCGTGGAGGCAGAGAAGGACATGCAGGTCGTAGAAGAACTCTTCAGCTGTGGAGACGTGAACGCCAA
GGCCAGTCAGGCGGGACAGACGGCCCTCATGCTAGCTGTCAGTCACGGGCGGATAGACATGGTGAAGGGC
CTGCTGGCCTGTGGAGCTGATGTCAATATCCAGGACGACGAGGGCTCCACCGCCCTGATGTGTGCCAGTG
AACACGGGCATGTGGAGATTGTGAAGCTGCTGCTGGCCCAGCCAGGCTGCAATGGCCACCTGGAAGACAA
TGATGGCAGCACCGCTCTCTCCATAGCCCTGGAAGCTGGACACAAGGACATTGCCGTTCTTCTGTACGCC
CACCTCAACTTCTCGAAAGCCCAGTCCCCGAGCACCCCGAGGCTTGGCAGAAAGACATCTCCTGGTCCCA
CTCACCGAGGTTCTTTTGACTGA

Translation (1360 aa):
MAYTTKVNGCAAEKADGVLNGDHNKEKKDPYFVETPYGFQLDLDFVKYVDDIQKGNTIKKLNIQKRRKPS
VPCPEVRAIPGHQGVWTSTESLSSSNSDDSKQCPSFLLARSHVTSTPIPRPPAPLETSPTFAVSENRQLL
PPPSPQLPRHNLHVTKTLMETRRRLEQERVTMQMAPGDFRRPRLASFGGMGSTSSLPSFVGSANHSSAIH
QLQNGYQGNGDYNSYVPAAPTTSSMGSSVRHSPLSSGISTPVTNVSPMHLQHIREQMAIALKRLKELEEQ
VRTIPVLQVKISVLQEEKRQLASQLKSQRASSQNEACGVRKRSYSAGNASQLELLARARRGGGELYIDYE
EEEMESVEQSTQRIQEFRQLTADMQALERKIQDSSCEVASELRENGQCPSRECKSVAVGSDENMNDVVVY
HRDLRPCKDTAVGTVTETRNVGISVTEAMLGVITEADKEIELQQQTIEALKEKIYRLEVQLKETTHDREM
TKLKQELQAAGSRKKVDKATMAQPLVFSKLVEALVPTRDQMVGSHVDTRESCVGTSVQTSSVGTSCHPDC
KNQVVGSELPMNWWVVKERVAMHDQCVGRSVETCDRSVGVEVSVCETGSNTEASGSDLTLLKTNLNLKDV
RSIGCGDCSVDVIVCFPKECTSRSMNTEAVGQEEAAVMAVPHTTDQHTSTNLERVDQCTNTEAATLVESC
TNTLLSTMDKQTSTQTVEMRTVAIGEGRVRDINPSTKTRSVGVGTVLSGNSEFDRPCAVKTKESGVGQIN
IQDNYLVGLKMRTIACGPPQLTVGLMGSRRSVGVGNEPVGELPEESPQPRVASGMVTGLDHYIERVQRLL
AEQQTLLAENYSELAEAFGEPHSQIGSLNSQLISTLSSINSVMKSASTEELRNSDFQKASLGKTTGNHLE
YTCKCGGLRSGGLLNVQPSQPEVEAETAEGKHSRGHEQFPMQGSTLPPVNLTDDQIATGLYVCPNNENTL
KSIMKKSDGNKDSNGAKKNLQFIGINGGYETTSSDESSSDGSSSSESDDECDTIGYPPEEEEEEEEKDHD
TRGMAEGHHAVNIEGFKSARVEDEVQVPECEPEKEEIRERYELSEKMLSACNLLKYNIKDPKALASKDMR
ICLNTLQHDWFRVSSQKSAVPAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLL
DADVCNVDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSHGRIDMVKG
LLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTALSIALEAGHKDIAVLLYA
HLNFSKAQSPSTPRLGRKTSPGPTHRGSFD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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