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Report for CCDS37112.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37112.1 Public Mus musculus 15 Puf60 23 108 98 CCDS HistoryNCBI Gene:67959Re-query CCDS DB by CCDS ID:37112.1Re-query CCDS DB by GeneID:67959See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37112.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100527.12 ENSMUSP00000098096.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100527.12Link to Ensembl Protein Viewer:ENSMUSP00000098096.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100527Re-query CCDS DB by Protein ID:ENSMUSP00000098096
Original member NCBI NM_028364.2 NP_082640.2 Updated not alive Link to Nucleotide Sequence:NM_028364.2Link to Protein Sequence:NP_082640.2Re-query CCDS DB by Nucleotide ID:NM_028364Re-query CCDS DB by Protein ID:NP_082640
Current member NCBI NM_028364.3 NP_082640.2 Accepted alive Link to Nucleotide Sequence:NM_028364.3Link to Protein Sequence:NP_082640.2Re-query CCDS DB by Nucleotide ID:NM_028364Re-query CCDS DB by Protein ID:NP_082640Link to BLAST:NP_082640.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082640.2 564 Q3UEB3-1 564 100% 0 0

Chromosomal Locations for CCDS 37112.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 76070328 76070627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76070749 76070984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76071182 76071317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76071466 76071656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76071740 76071953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76072233 76072325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76072407 76072568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76074607 76074657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76075542 76075631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76075737 76075832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76077601 76077702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 76080850 76080873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1695 nt):
ATGGCGACGGCGACTATAGCTCTCCAGGTCAATGGCCAACAAGGAGGAGGGTCGGAGCCAGCAGCAGCGG
CTGCAGCGGCGGCGGCGGCAGTGGTGGCAGCAGGAGACAAATGGAAACCTCCACAGGGCACAGAATCCAT
CAAGATGGAAAATGGACAAAGCACAGGCACCAAGCTGGGGCTGCCTCCCCTGACGCCCGAGCAGCAGGAG
GCCCTCCAGAAGGCCAAGAAATATGCAATGGAGCAGAGCATCAAGAGTGTGCTGGTGAAACAGACCATCG
CGCACCAGCAGCAGCAGCTCACCAACCTGCAGATGGCAGCAGTGACAATGGGCTTTGGAGATCCTCTCTC
ACCTTTGCAATCGATGGCAGCTCAACGGCAGCGGGCACTGGCTATCATGTGCCGGGTCTATGTGGGCTCC
ATCTACTATGAGCTGGGAGAAGACACTATTCGCCAGGCCTTTGCTCCCTTTGGCCCCATCAAGAGCATTG
ATATGTCCTGGGACTCCGTTACCATGAAGCATAAGGGCTTTGCCTTCGTGGAGTACGAGGTCCCAGAAGC
TGCGCAGCTCGCTTTGGAGCAGATGAACTCTGTGATGCTTGGGGGCAGGAACATCAAGGTGGGAAGACCC
AGCAACATTGGACAAGCCCAACCCATCATAGATCAGCTGGCTGAGGAAGCTAGGGCTTTCAACCGAATAT
ATGTGGCCTCTGTACATCAAGACCTGTCTGATGATGACATCAAGAGTGTATTTGAAGCCTTTGGCAAGAT
CAAGTCTTGTACGCTGGCCCGGGACCCCACAACTGGCAAGCACAAGGGCTATGGTTTTATCGAATATGAG
AAGGCCCAGTCGTCCCAGGATGCTGTGTCCTCCATGAACCTCTTTGATCTGGGTGGCCAGTACTTGAGGG
TGGGCAAGGCCGTCACACCCCCCATGCCCCTGCTAACACCTGCCACGCCTGGAGGTCTCCCGCCTGCTGC
TGCTGTGGCCGCAGCTGCAGCCACGGCCAAGATTACAGCTCAGGAAGCAGTGGCTGGAGCAGCAGTGCTG
GGTACTTTAGCCACACCAGGACTAGTGTCCCCAGCACTGACACTGGCCCAGCCCTTAGGGGCCCTACCCC
AGGCTGTCATGGCTGCCCAGGCCCCTGGAGTCATCACAGGTGTGACACCAGCCCGCCCTCCTATTCCGGT
CACCATCCCCTCTGTGGGAGTAGTGAACCCCATTCTCGCCAGCCCGCCAACGTTGGGTCTGTTGGAGCCC
AAGAAGGAGAAGGAAGAGGAGGAGCTGTTTCCTGAGTCAGAACGGCCAGAGATGTTGAGTGAGCAGGAGC
ACATGAGCATCTCGGGCAGCAGTGCTCGCCACATGGTCATGCAAAAGCTACTCAGAAAACAGGAGTCTAC
AGTGATGGTTCTCCGAAACATGGTGGACCCCAAGGACATCGATGACGACCTGGAGGGAGAGGTGACAGAG
GAGTGTGGCAAATTTGGTGCTGTGAACCGGGTCATTATCTATCAAGAAAAACAGGGCGAAGAGGAAGATG
CAGAAATCATCGTCAAGATTTTTGTGGAATTCTCCATGGCCTCAGAGACTCACAAGGCCATCCAGGCCCT
CAATGGGCGCTGGTTTGGTGGTCGCAAGGTGGTGGCTGAAGTGTATGACCAGGAGCGTTTTGATAACAGC
GACCTCTCCGCGTGA

Translation (564 aa):
MATATIALQVNGQQGGGSEPAAAAAAAAAAVVAAGDKWKPPQGTESIKMENGQSTGTKLGLPPLTPEQQE
ALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGS
IYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVGRP
SNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYE
KAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVL
GTLATPGLVSPALTLAQPLGALPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEP
KKEKEEEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTE
ECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASETHKAIQALNGRWFGGRKVVAEVYDQERFDNS
DLSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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