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Report for CCDS37034.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37034.1 Public Mus musculus 15 Nup155 23 108 98 CCDS HistoryNCBI Gene:170762Re-query CCDS DB by CCDS ID:37034.1Re-query CCDS DB by GeneID:170762See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37034.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000163765.2 ENSMUSP00000128819.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000163765.2Link to Ensembl Protein Viewer:ENSMUSP00000128819.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000163765Re-query CCDS DB by Protein ID:ENSMUSP00000128819
Original member Current member NCBI NM_133227.3 NP_573490.3 Accepted alive Link to Nucleotide Sequence:NM_133227.3Link to Protein Sequence:NP_573490.3Re-query CCDS DB by Nucleotide ID:NM_133227Re-query CCDS DB by Protein ID:NP_573490Link to BLAST:NP_573490.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_573490.3 1391 Q99P88 1391 100% 0 0

Chromosomal Locations for CCDS 37034.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 8109446 8109602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8112283 8112420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8113644 8113740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8115479 8115549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8116430 8116522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8117234 8117400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8117982 8118087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8119179 8119252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8120434 8120525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8121463 8121560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8122056 8122208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8124223 8124323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8128408 8128578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8130125 8130235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8131462 8131556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8134075 8134163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8134663 8134725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8135758 8135905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8136633 8136699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8137854 8137969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8139851 8139948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8141229 8141359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8142968 8143159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8144051 8144189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8145488 8145623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8147143 8147296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8147498 8147602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8148297 8148451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8150758 8150887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8151713 8151826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8153116 8153236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8153640 8153750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8154916 8155052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8156686 8156792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 8157626 8157764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4176 nt):
ATGCCATCGGTGCTGGGCTCTATGATGGTGGCCTCTACGTCGGCCGCCGCCTCCCTGCAGGAAGCTTTGG
AAAACGCGGGGAGGCTTATCGATCGACAGTTGCAAGAAGACCGCATGTACCCGGACCTTTCTGAGCTGCT
CATGGTGTCGGCCCCAAACAGTCCTACTGTTTCTGGAATGTCCGACATGGATTACCCTCTGCAAGGACCA
GGTTTGCTGTCAGTACCCAGCCTTCCAGAGATCAGCACTATCCGGAGAGTTCCCCTCCCGCCTGAGCTGG
TTGAACAGTTTGGACACATGCAGTGCAACTGCATGATGGGCGTTTTCCCCCCGATCAGCAGAGCCTGGCT
TACGATTGACAGTGACATATTCATGTGGAACTATGAAGATGGAGGTGACCTTGCCTATTTTGATGGACTC
AGTGAGACAATTCTTGCTGTGGGGCTTGTGAAACCAAAAGCTGGCATCTTTCAACCTCATGTAAGACACT
TGCTGGTTTTGGCAACCCCTGTGGATATAGTAATTCTTGGACTCAGCTATGCTAATGTACAAACAGGTTC
TGGCATTCTCAATGACAGCATGTGTGGCGGCATGCAGCTGCTTCCAGATCCCTTATATTCTCTTCCCACG
GACAACACGTACCTTTTAACAATCACGTCCACGGATAATGGCAGAATCTTTCTGGCTGGAAAGGATGGCT
GTTTGTACGAAGTAGCATACCAAGCAGAAGCAGGCTGGTTCAGTCAAAGATGTAGGAAGATCAATCACTC
CAAGAGCTCGCTCTCCTTCCTGGTGCCTTCCTTGCTGCAGTTCACGTTCTCAGAAGATGATCCTATTGTT
CAAATTGAAATTGATAATTCCAGAAATATTTTGTATACACGATCGGAGAAAGGAGTTATACAGGTTTATG
ATTTGGGCCATGATGGACAGGGGATGAGTAGAGTTGCTTCAGTTTCACAGAATGCCATTGTCTCTGCTGC
TGGAAACATTGCTAGGACTATTGATCGTTCCGTCTTTAAGCCAATTGTTCAGATAGCTGTGATTGAGAGT
TCTGAATCCCTGGACTGTCAGTTACTGGCTGTCACTCACGCAGGTGTAAGGCTGTATTTCAGCACTTGTC
CGTTTAGACAGCCATTAGCTCGGCCGAATACACTGACACTGGTCCACGTCCGGTTACCTCCTGGATTTTC
AGCATCATCAACAGTGGAAAAGCCTTCAAAAGTGCACAAAGCACTTTACAGTAAAGGAATTTTACTGATG
ACAGCCTCAGAAAATGAAGATAATGACATTTTATGGTGTGTCAACCATGATACATTTCCTTTTCAAAAGC
CAATGATGGAAACTCAGATGACAACCCGTGTTGATGGTCATTCCTGGGCTCTCTCTGCAATAGATGAATT
AAAAGTAGATAAAATAATTACACCGTTAAATAAAGATCATATTCCAATAACTGATTCGCCAGTTGTTGTA
CAACAGCACATGTTGCCTCCAAAGAAATTCGTTCTCCTCTCAGCACAGGGTAGTCTTATGTTTCACAAGC
TTAGACCTGTAGATCAGCTGAGACATCTGCTTGTGAGTAACGTGGGAGGGGATGGAGAAGAGATTGAGAG
ATTCTTCAAATTACATCAGGAAGACCAAGCTTGTGCAACTTGCCTTATTCTTGCTTGTTCCACTGCTGCC
TGTGACAGAGAAGTGTCTGCTTGGGCAACACGGGCATTCTTTAGGTATGGTGGTGAGGCACAGATGAGAT
TTCCAGCTACTCTTCCTACTCCAAGCAACGTTGGTCCCATCCTTGGCTCTCCTATGTATTCTAGTTCTCC
TGTCCCTAGTGGGAGTCCCTATCCAAATCCATCCTCCTTGGGGACACCATCCCATGGTGCTCAGCCGCCT
ACCATGTCAACCCCAATGTGTGCTGTTGGAAGCCCAGCCATGCAGGCTGCAAGCATGAGTGGTTTGACTG
GGCCAGAGATTGTGTACTCAGGAAAACACAACGGTATTTGCATTTACTTTTCTCGAATCATGGGAAATAT
TTGGGATGCGAGCTTAGTTGTTGAAAGAGTATTCAAGAGTTCCAACAGGGAGATCACTGCAATTGAGAGC
AGTGTGCCCGTCCAGCTGCTGGAGTCAGTGCTGCAGGAGCTGAAGGGCTTGCAGGAGTTTCTAGACAGAA
ACTCCCAGTTTTCAGGTGGACCCCTGGGAAATCCAAATACTACTGCCAGAGTGCAGCAGCGGCTGGTTGG
GTTCATGCGTCCCGAGAATGGAAACACCCAGCAAATGCAACAGGAGCTGCAGAGGAAGTTTCAGGAGGCT
CAACTGAGTGAAAAGATTTCACTTCAGGCGATCCAGCAGCTGGTTAGAAAATCGTACCAAGCTCTGGCTC
TCTGGAAACTCCTTTGTGAACATCAGTTTTCTGTCATTGTCGGAGAACTTCAAAAGGAATTTCAAGAGCA
GCTGAAGATCACCACCTTTAAGGATCTGGTGATCAGGGACAAAGAGGTCACTGGAGCATTAATTGCTTCT
CTTATCAACTGCTACATCAGAGACAACGCCGCCGTAGACGGCATTAGCTTACATCTGCAGGACACCTGTC
CGCTTCTGTATAGCACAGACGATGCAGTTTGTTCTAAGGCAAATGAGCTCCTTCAGCGTTCCCGACAAGT
TCAGAGTAAGACTGAGAGAGAGAGGATGTTACGGGAGTCACTGAAGGAGTATCAGAAGATCAGCAACCAA
GTGGACCTTCCCAGTGTCTGTGCTCAGTATAGGCAAGTGCGTTTTTATGAGGGTGTGGTGGAACTTTCTC
TTACTGCTGCCGAGAAAAAAGATCCTCAGGGTCTTGGACTCCATTTCTATAAACATGGGGAACCAGAAGA
GGATGTGGTTGGTCTTCAGACTTTCCAAGAGAGATTAAACAGTTACAAGTGCATTACGGATACTCTGCAA
GAGCTGGTAAATCAAAGTAAGGCAGCTCCCCAGTCTCCCAGTGTACCCAAAAAGCCTGGGCCTCCAGTGC
TGTCATCTGATCCCAACATGCTGAGCAATGAAGAAGCAGGACATCACTTTGAACAAATGCTTAAATTGGC
ACAGCGGTCCAAGGATGAGCTCTTCAGCATTGCTCTTTATAACTGGCTAATACAAGCTGACCTTGCAGAT
AAACTGCTACAGATTGCGTCACCATTTCTGGAGCCACATCTTGTGCGAATGGCCAGAGTGGATCAGAACA
GAGTCCGCTATATGGATTTACTCTGGAGGTATTACGAGAAGAACAGGAGCTTCAGCAGCGCCGCTCGGGT
CCTATCCAAGTTGGCGGACATGCACAGCACAGAAATTTCACTTCAGCAGCGACTAGAATACATTGCTCGA
GCCATCCTTAGTGCGAAAAGTTCCACTGCCATCTCATCCATAGCTGCAGATGGTGAATTCCTGCATGAGT
TAGAAGAGAAAATGGAAGTTGCTAGAATCCAACTTCAGATACAAGAGACACTACAAAGGCAGTACTCCCA
TCATTCTTCAGTGCAGGATGCAATTTCTCAGCTGGATTCTGAGCTCATGGACATTACTAAGCTCTATGGG
GAATTTGCTGACCCGTTTAAACTTGCAGAGTGTAAACTTGCAGTCATTCATTGCGCTGGTTACTCAGATC
CCATATTGGTGCACACACTCTGGCAAGATATCATAGAGAAAGAATTGAACGACAGCGTAGCATTGAGCTC
GTCAGATCGAATGCATGCTCTCAGCCTCAAGCTTGTCCTCCTCGGCAAAATCTATGCTGGGACGCCTCGG
TTTTTCCCTCTGGATTTTATCGTGCAGTTCTTGGAGCAGCAAGTTTGTACCTTAAACTGGGATGTGGGGT
TTGTGATACAGACCATGAATGAAATCGGCGTGCCTTTACCTAGGCTGCTAGAAGTTTATGATCAGCTCTT
CAAATCACGGGATCCATTCTGGAACAGAGTGAAAAGCCCACTGCACCTTCTGGATTGTATCCATGTACTG
TTGACAAGATATGTTGAGAATCCTAGCCTAGTTTTAAATTGTGAGAGGAGAAGGTTTACAAATCTCTGCC
TGGATGCCGTCTGTGGATATCTGGTGGAACTTCAGTCAATGAGTTCTTCAGTAGCAGTACAAGCCATCAC
TGGGAATTTTAAATCGCTCCAAGCAAAGCTGGAACGGCTCCATTGA

Translation (1391 aa):
MPSVLGSMMVASTSAAASLQEALENAGRLIDRQLQEDRMYPDLSELLMVSAPNSPTVSGMSDMDYPLQGP
GLLSVPSLPEISTIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGL
SETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANVQTGSGILNDSMCGGMQLLPDPLYSLPT
DNTYLLTITSTDNGRIFLAGKDGCLYEVAYQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPIV
QIEIDNSRNILYTRSEKGVIQVYDLGHDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIES
SESLDCQLLAVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHKALYSKGILLM
TASENEDNDILWCVNHDTFPFQKPMMETQMTTRVDGHSWALSAIDELKVDKIITPLNKDHIPITDSPVVV
QQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATCLILACSTAA
CDREVSAWATRAFFRYGGEAQMRFPATLPTPSNVGPILGSPMYSSSPVPSGSPYPNPSSLGTPSHGAQPP
TMSTPMCAVGSPAMQAASMSGLTGPEIVYSGKHNGICIYFSRIMGNIWDASLVVERVFKSSNREITAIES
SVPVQLLESVLQELKGLQEFLDRNSQFSGGPLGNPNTTARVQQRLVGFMRPENGNTQQMQQELQRKFQEA
QLSEKISLQAIQQLVRKSYQALALWKLLCEHQFSVIVGELQKEFQEQLKITTFKDLVIRDKEVTGALIAS
LINCYIRDNAAVDGISLHLQDTCPLLYSTDDAVCSKANELLQRSRQVQSKTERERMLRESLKEYQKISNQ
VDLPSVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDVVGLQTFQERLNSYKCITDTLQ
ELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLAQRSKDELFSIALYNWLIQADLAD
KLLQIASPFLEPHLVRMARVDQNRVRYMDLLWRYYEKNRSFSSAARVLSKLADMHSTEISLQQRLEYIAR
AILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAISQLDSELMDITKLYG
EFADPFKLAECKLAVIHCAGYSDPILVHTLWQDIIEKELNDSVALSSSDRMHALSLKLVLLGKIYAGTPR
FFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRVKSPLHLLDCIHVL
LTRYVENPSLVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGNFKSLQAKLERLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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