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Report for CCDS33124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33124.1 Public Homo sapiens 19 USP29 24 110 108 CCDS HistoryNCBI Gene:57663Re-query CCDS DB by CCDS ID:33124.1Re-query CCDS DB by GeneID:57663See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33124.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254181.9 ENSP00000254181.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254181.9Link to Ensembl Protein Viewer:ENSP00000254181.3Re-query CCDS DB by Nucleotide ID:ENST00000254181Re-query CCDS DB by Protein ID:ENSP00000254181
Original member Current member EBI ENST00000598197.1 ENSP00000470747.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000598197.1Link to Ensembl Protein Viewer:ENSP00000470747.1Re-query CCDS DB by Nucleotide ID:ENST00000598197Re-query CCDS DB by Protein ID:ENSP00000470747
Original member Current member NCBI NM_001389643.1 NP_001376572.1 Accepted alive Link to Nucleotide Sequence:NM_001389643.1Link to Protein Sequence:NP_001376572.1Re-query CCDS DB by Nucleotide ID:NM_001389643Re-query CCDS DB by Protein ID:NP_001376572Link to BLAST:NP_001376572.1
Original member Current member NCBI NM_020903.3 NP_065954.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020903.3Link to Protein Sequence:NP_065954.1Re-query CCDS DB by Nucleotide ID:NM_020903Re-query CCDS DB by Protein ID:NP_065954Link to BLAST:NP_065954.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001376572.1 922 Q9HBJ7 922 100% 0 0
NP_065954.1 922 Q9HBJ7 922 100% 0 0

Chromosomal Locations for CCDS 33124.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57128676 57131444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2769 nt):
ATGATATCTCTAAAGGTATGTGGATTCATCCAAATTTGGAGCCAGAAGACTGGGATGACTAAGCTGAAAG
AA
GCTCTCATTGAAACAGTGCAAAGACAAAAGGAAATTAAACTGGTGGTCACTTTCAAATCTGGAAAATT
T
ATAAGAATTTTTCAGCTGAGCAACAACATTAGAAGTGTGGTCCTTAGACATTGTAAAAAAAGACAAAGT
CAC
CTGCGTTTAACTTTGAAAAACAACGTGTTCTTGTTTATTGACAAATTATCCTACAGAGATGCTAAAC
AG
TTGAATATGTTCCTGGACATAATCCACCAAAACAAATCTCAGCAACCCATGAAATCTGATGATGATTG
G
AGTGTGTTTGAAAGCAGGAATATGCTGAAGGAAATTGACAAAACTTCATTTTACAGCATTTGTAACAAG
CCA
AGTTATCAGAAGATGCCTTTGTTTATGTCAAAATCACCAACACATGTGAAAAAGGGGATATTAGAAA
AT
CAAGGTGGGAAGGGGCAAAACACACTATCATCTGATGTACAGACAAATGAGGACATTCTGAAGGAAGA
T
AACCCTGTACCAAACAAGAAATATAAGACAGATTCCTTGAAATATATACAAAGCAATAGGAAGAACCCA
TCA
AGTTTAGAGGATTTAGAAAAAGATAGAGATTTGAAACTCGGGCCTTCATTCAATACCAACTGTAATG
GA
AATCCTAACCTAGATGAGACTGTTCTTGCAACCCAGACTCTCAATGCCAAAAATGGTTTGACATCTCC
A
TTGGAACCAGAGCACAGCCAGGGTGACCCAAGATGCAACAAAGCCCAGGTGCCTCTTGACTCTCATTCA
CAG
CAACTGCAGCAGGGGTTCCCCAATTTGGGAAACACCTGTTACATGAATGCAGTTTTACAATCGCTAT
TT
GCAATTCCATCTTTTGCTGATGACTTACTCACTCAAGGTGTCCCATGGGAATATATTCCCTTTGAGGC
T
CTTATTATGACCTTGACCCAGCTGCTTGCTTTGAAAGATTTCTGTAGTACAAAGATCAAGAGAGAATTA
CTT
GGGAATGTTAAAAAAGTCATTTCAGCAGTTGCAGAAATATTTTCTGGCAACATGCAGAATGATGCTC
AT
GAGTTTTTAGGTCAGTGTTTAGACCAGCTGAAAGAAGACATGGAAAAATTAAATGCCACTTTGAATAC
T
GGGAAAGAATGTGGGGATGAAAATTCATCTCCACAAATGCATGTTGGTAGTGCTGCCACCAAAGTGTTT
GTT
TGCCCTGTTGTTGCTAATTTTGAGTTTGAATTGCAGCTCTCCCTTATTTGTAAAGCTTGTGGTCATG
CT
GTTCTCAAGGTAGAACCTAATAATTATCTCTCCATCAACCTGCACCAAGAAACAAAACCACTTCCTTT
G
TCCATTCAGAATTCTTTAGATCTTTTCTTTAAAGAAGAAGAGCTTGAATATAACTGTCAGATGTGTAAG
CAG
AAGAGTTGTGTTGCAAGGCATACATTTAGTAGGCTCTCCAGGGTCCTTATCATTCATCTGAAACGCT
AT
AGCTTCAACAATGCTTGGTTGCTGGTGAAGAATAACGAGCAAGTTTATATTCCCAAATCTTTAAGTTT
A
TCTTCTTATTGCAATGAAAGCACCAAACCACCTCTTCCCTTGAGCAGTAGTGCACCTGTTGGGAAATGT
GAA
GTCCTGGAAGTCTCTCAGGAGATGATTTCTGAGATCAACAGCCCATTGACACCATCAATGAAGCTGA
CC
TCAGAATCCAGTGATTCCCTGGTTCTACCCGTTGAACCAGACAAGAATGCCGACCTACAAAGATTCCA
G
AGAGACTGTGGAGATGCAAGCCAAGAGCAGCATCAGAGAGACCTGGAAAATGGCTCTGCACTAGAGTCA
GAA
TTGGTCCACTTTAGAGATAGGGCAATCGGTGAAAAGGAGCTTCCAGTGGCTGACTCACTGATGGACC
AG
GGAGACATTTCTCTTCCTGTGATGTATGAAGATGGAGGGAAGCTGATCAGCAGCCCAGACACAAGGCT
T
GTCGAGGTTCATCTTCAAGAGGTGCCTCAACATCCAGAACTTCAGAAGTATGAGAAAACCAATACATTC
GTA
GAGTTCAATTTTGACAGTGTCACTGAGTCCACCAATGGCTTTTATGACTGTAAAGAAAACAGGATTC
CA
GAAGGATCTCAAGGAATGGCTGAACAGCTCCAGCAGTGTATTGAGGAGAGCATCATAGATGAATTTCT
T
CAGCAGGCACCACCTCCAGGTGTTAGGAAGCTGGATGCCCAGGAACATACAGAAGAGACCCTCAATCAG
TCT
ACAGAATTAAGACTTCAAAAGGCTGACCTGAATCACCTTGGGGCACTGGGTTCTGACAACCCAGGAA
AC
AAAAACATTTTAGATGCAGAGAACACAAGAGGTGAAGCCAAGGAACTAACAAGAAACGTGAAGATGGG
G
GATCCTCTCCAGGCCTACAGACTCATCAGTGTTGTCAGCCATATCGGGAGCTCCCCAAATTCAGGCCAT
TAC
ATCAGCGATGTGTATGACTTTCAGAAGCAGGCCTGGTTCACATACAACGATCTATGTGTATCAGAAA
TC
TCAGAGACCAAAATGCAGGAGGCGAGGCTTCACTCTGGGTATATCTTCTTTTACATGCACAATGGGAT
T
TTTGAGGAGCTGTTAAGAAAAGCAGAGAACTCTCGGCTACCTAGCACACAGGCAGGGGTGATCCCTCAG
GGG
GAATACGAAGGTGACTCTTTGTACAGACCTGCTTGA


Translation (922 aa):
MISLKVCGFIQIWSQKTGMTKLKEALIETVQRQKEIKLVVTFKSGKFIRIFQLSNNIRSVVLRHCKKRQS
H
LRLTLKNNVFLFIDKLSYRDAKQLNMFLDIIHQNKSQQPMKSDDDWSVFESRNMLKEIDKTSFYSICNK
P
SYQKMPLFMSKSPTHVKKGILENQGGKGQNTLSSDVQTNEDILKEDNPVPNKKYKTDSLKYIQSNRKNP
S
SLEDLEKDRDLKLGPSFNTNCNGNPNLDETVLATQTLNAKNGLTSPLEPEHSQGDPRCNKAQVPLDSHS
Q
QLQQGFPNLGNTCYMNAVLQSLFAIPSFADDLLTQGVPWEYIPFEALIMTLTQLLALKDFCSTKIKREL
L
GNVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLKEDMEKLNATLNTGKECGDENSSPQMHVGSAATKVF
V
CPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCK
Q
KSCVARHTFSRLSRVLIIHLKRYSFNNAWLLVKNNEQVYIPKSLSLSSYCNESTKPPLPLSSSAPVGKC
E
VLEVSQEMISEINSPLTPSMKLTSESSDSLVLPVEPDKNADLQRFQRDCGDASQEQHQRDLENGSALES
E
LVHFRDRAIGEKELPVADSLMDQGDISLPVMYEDGGKLISSPDTRLVEVHLQEVPQHPELQKYEKTNTF
V
EFNFDSVTESTNGFYDCKENRIPEGSQGMAEQLQQCIEESIIDEFLQQAPPPGVRKLDAQEHTEETLNQ
S
TELRLQKADLNHLGALGSDNPGNKNILDAENTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSGH
Y
ISDVYDFQKQAWFTYNDLCVSEISETKMQEARLHSGYIFFYMHNGIFEELLRKAENSRLPSTQAGVIPQ
G
EYEGDSLYRPA




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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