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Report for CCDS32445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32445.1 Public Homo sapiens 16 ZNF423 24 110 108 CCDS HistoryNCBI Gene:23090Re-query CCDS DB by CCDS ID:32445.1Re-query CCDS DB by GeneID:23090See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561648.5 ENSP00000455426.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561648.5Link to Ensembl Protein Viewer:ENSP00000455426.1Re-query CCDS DB by Nucleotide ID:ENST00000561648Re-query CCDS DB by Protein ID:ENSP00000455426
Original member Current member NCBI NM_015069.5 NP_055884.2 Accepted alive Link to Nucleotide Sequence:NM_015069.5Link to Protein Sequence:NP_055884.2Re-query CCDS DB by Nucleotide ID:NM_015069Re-query CCDS DB by Protein ID:NP_055884Link to BLAST:NP_055884.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055884.2 1284 Q2M1K9-1 1284 100% 0 0

Chromosomal Locations for CCDS 32445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 49491275 49491304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49523624 49523739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49525363 49525494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49626170 49626254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49635660 49638874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49730771 49730971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49789487 49789546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 49822670 49822685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3855 nt):
ATGCATAAGAAGAGGGTTGAAGAGGGGGAGGCCTCAGACTTCTCGCTGGCCTGGGATTCCTCCGTGACAG
CAGCAGGAGGCCTAGAAGGAGAGCCAGAGTGCGATCAGAAAACCAGCCGTGCGCTGGAAGACAGGAACAG
CGTGACAAGTCAAGAGGAGAGAAATGAGGATGATGAAGACATGGAGGATGAATCAATTTACACCTGCGAT
CACTGTCAGCAGGACTTCGAGTCTCTGGCAGACCTGACGGACCACCGGGCCCACCGCTGTCCTGGAGATG
GTGATGACGACCCACAACTCTCCTGGGTGGCCTCGTCTCCCTCCAGCAAGGATGTTGCGTCACCCACGCA
GATGATCGGAGATGGTTGTGACCTCGGCCTCGGCGAGGAGGAAGGGGGCACGGGCCTGCCATACCCTTGC
CAGTTCTGCGACAAGTCCTTCATCCGCTTGAGCTACTTGAAGAGGCACGAGCAGATCCACAGCGACAAGC
TGCCGTTCAAGTGCACCTACTGCAGCCGCCTCTTCAAGCACAAGAGGAGCCGTGACCGGCACATCAAGCT
GCATACGGGCGACAAGAAGTATCACTGCCACGAGTGCGAGGCAGCCTTCTCCCGCAGCGACCACCTCAAG
ATCCACCTGAAGACCCACAGCTCCAGCAAGCCCTTCAAGTGCACTGTGTGCAAGCGCGGCTTCTCCTCCA
CCAGCTCGCTGCAGAGCCACATGCAGGCCCACAAAAAGAACAAGGAGCATCTGGCCAAGTCGGAGAAGGA
AGCCAAGAAGGACGACTTCATGTGCGACTACTGCGAGGACACCTTCAGCCAGACGGAGGAGCTGGAGAAG
CACGTGCTCACCCGCCACCCGCAGCTGTCCGAGAAGGCGGACCTGCAGTGCATTCACTGCCCTGAGGTCT
TCGTCGACGAGAACACACTGCTCGCCCATATCCACCAAGCCCACGCCAACCAGAAACACAAGTGCCCCAT
GTGCCCTGAGCAGTTCTCCTCAGTGGAAGGTGTCTACTGCCACCTGGACAGCCACCGGCAGCCCGACTCC
AGCAACCACAGTGTCAGTCCCGACCCTGTACTGGGCAGCGTGGCCTCCATGAGCAGCGCCACACCCGACT
CCAGCGCCTCTGTGGAGCGTGGCTCCACCCCGGACTCCACCTTGAAGCCGCTGCGGGGGCAGAAGAAGAT
GCGGGATGACGGGCAGGGCTGGACCAAGGTGGTCTATAGCTGCCCCTATTGTTCCAAGCGGGACTTTAAC
AGCCTGGCCGTGCTGGAGATCCACCTGAAGACCATCCACGCGGACAAGCCCCAGCAGAGCCACACATGTC
AGATCTGCCTGGACTCCATGCCCACCCTCTACAACCTCAACGAGCACGTTCGCAAGCTGCACAAGAACCA
TGCCTACCCTGTGATGCAGTTTGGCAACATCTCTGCCTTCCACTGCAACTACTGCCCCGAGATGTTCGCC
GACATCAATAGCCTGCAGGAGCACATCCGCGTCTCCCACTGCGGCCCCAACGCCAACCCCTCTGACGGTA
ATAATGCTTTCTTCTGCAACCAGTGCTCCATGGGTTTCCTTACTGAGTCCTCCCTCACCGAGCACATCCA
GCAGGCCCACTGCAGTGTGGGCAGTGCCAAACTAGAGTCTCCGGTGGTGCAGCCCACGCAGTCCTTCATG
GAGGTCTATTCCTGCCCCTACTGCACCAACTCCCCCATCTTTGGCTCCATCCTGAAACTCACCAAGCACA
TCAAGGAGAACCACAAGAACATTCCACTGGCCCACAGCAAGAAGTCCAAGGCCGAGCAGAGCCCAGTCTC
GTCCGATGTGGAGGTGTCTTCCCCGAAGCGGCAGCGGCTCTCAGCAAGCGCCAACTCCATCTCCAATGGG
GAGTATCCTTGCAATCAATGCGACCTCAAGTTCTCCAACTTTGAGAGCTTCCAGACCCACCTGAAGCTGC
ACCTGGAGCTGCTGCTGCGGAAGCAAGCGTGCCCCCAGTGCAAAGAGGACTTTGACTCCCAGGAGTCCCT
CCTGCAGCACCTGACAGTGCATTACATGACCACGTCGACCCACTATGTGTGCGAGAGCTGCGACAAGCAA
TTTTCCTCGGTGGATGACCTGCAGAAGCACCTGCTGGACATGCACACCTTTGTGTTGTACCACTGCACCC
TGTGTCAGGAGGTCTTCGACTCCAAGGTGTCCATCCAGGTGCACCTGGCGGTGAAGCACAGCAATGAGAA
GAAGATGTACCGCTGCACGGCCTGCAACTGGGACTTCCGCAAGGAGGCTGACCTGCAGGTGCACGTCAAA
CACAGCCACCTGGGCAACCCGGCCAAGGCTCACAAGTGCATCTTCTGTGGGGAGACCTTCAGCACCGAGG
TGGAGCTGCAGTGCCACATCACCACACACAGCAAGAAGTATAACTGTAAGTTCTGCAGCAAGGCCTTCCA
CGCCATCATCCTGCTGGAGAAGCACCTGCGGGAGAAGCACTGTGTGTTTGATGCTGCGACCGAGAACGGC
ACGGCCAATGGGGTACCCCCAATGGCCACCAAGAAAGCTGAGCCTGCTGACCTGCAGGGCATGCTGCTTA
AGAACCCTGAGGCACCTAACAGCCATGAGGCCAGCGAGGATGACGTGGACGCGTCGGAGCCCATGTACGG
CTGTGACATCTGTGGGGCGGCCTACACCATGGAGGTGCTGCTGCAGAATCACCGGCTGCGGGACCACAAT
ATCCGGCCGGGCGAGGATGATGGCTCACGCAAGAAGGCTGAGTTTATCAAGGGCAGTCACAAGTGCAACG
TTTGTTCACGGACTTTCTTCTCGGAGAACGGGCTACGGGAGCACCTGCAGACGCACCGGGGCCCTGCCAA
GCACTACATGTGTCCCATCTGTGGTGAGCGCTTCCCTTCGCTGCTGACGCTCACCGAACACAAGGTGACC
CACAGCAAGAGCCTGGACACGGGCACCTGTCGCATCTGCAAGATGCCCCTGCAGAGCGAGGAGGAGTTTA
TTGAGCACTGCCAGATGCACCCTGACCTGCGCAACTCACTCACGGGCTTCCGCTGTGTGGTCTGCATGCA
GACAGTCACTTCCACGCTTGAGCTCAAGATCCATGGCACCTTCCACATGCAGAAGCTGGCGGGCAGCTCA
GCGGCGTCCTCCCCCAATGGCCAGGGGCTGCAGAAGCTCTACAAGTGCGCCCTGTGCCTCAAGGAGTTCC
GCAGCAAGCAGGACCTGGTGAAGCTTGACGTCAATGGGCTGCCCTACGGCCTCTGCGCCGGCTGCATGGC
CCGCAGCGCCAACGGACAGGTGGGTGGCCTGGCCCCGCCCGAGCCCGCCGACCGGCCCTGTGCCGGCCTC
CGTTGCCCCGAGTGCAGTGTCAAGTTTGAGAGTGCCGAAGACCTGGAGAGCCACATGCAGGTGGACCACC
GTGACCTCACGCCGGAGACCAGTGGGCCCCGGAAAGGCACCCAGACATCGCCAGTGCCCCGGAAAAAGAC
ATACCAGTGCATCAAGTGCCAGATGACCTTCGAGAACGAGAGAGAGATCCAAATCCACGTTGCCAACCAC
ATGATTGAGGAAGGCATCAACCACGAGTGTAAGCTGTGCAACCAGATGTTCGACTCCCCGGCCAAGCTCC
TCTGTCACCTCATTGAGCACAGCTTCGAGGGCATGGGCGGCACCTTCAAATGCCCCGTGTGTTTCACAGT
CTTCGTCCAGGCCAACAAGTTGCAGCAGCACATCTTTGCCGTGCACGGGCAGGAGGACAAGATCTACGAC
TGCTCACAGTGCCCTCAGAAGTTCTTCTTCCAGACCGAGCTGCAGAACCACACGATGAGCCAGCACGCAC
AGTGA

Translation (1284 aa):
MHKKRVEEGEASDFSLAWDSSVTAAGGLEGEPECDQKTSRALEDRNSVTSQEERNEDDEDMEDESIYTCD
HCQQDFESLADLTDHRAHRCPGDGDDDPQLSWVASSPSSKDVASPTQMIGDGCDLGLGEEEGGTGLPYPC
QFCDKSFIRLSYLKRHEQIHSDKLPFKCTYCSRLFKHKRSRDRHIKLHTGDKKYHCHECEAAFSRSDHLK
IHLKTHSSSKPFKCTVCKRGFSSTSSLQSHMQAHKKNKEHLAKSEKEAKKDDFMCDYCEDTFSQTEELEK
HVLTRHPQLSEKADLQCIHCPEVFVDENTLLAHIHQAHANQKHKCPMCPEQFSSVEGVYCHLDSHRQPDS
SNHSVSPDPVLGSVASMSSATPDSSASVERGSTPDSTLKPLRGQKKMRDDGQGWTKVVYSCPYCSKRDFN
SLAVLEIHLKTIHADKPQQSHTCQICLDSMPTLYNLNEHVRKLHKNHAYPVMQFGNISAFHCNYCPEMFA
DINSLQEHIRVSHCGPNANPSDGNNAFFCNQCSMGFLTESSLTEHIQQAHCSVGSAKLESPVVQPTQSFM
EVYSCPYCTNSPIFGSILKLTKHIKENHKNIPLAHSKKSKAEQSPVSSDVEVSSPKRQRLSASANSISNG
EYPCNQCDLKFSNFESFQTHLKLHLELLLRKQACPQCKEDFDSQESLLQHLTVHYMTTSTHYVCESCDKQ
FSSVDDLQKHLLDMHTFVLYHCTLCQEVFDSKVSIQVHLAVKHSNEKKMYRCTACNWDFRKEADLQVHVK
HSHLGNPAKAHKCIFCGETFSTEVELQCHITTHSKKYNCKFCSKAFHAIILLEKHLREKHCVFDAATENG
TANGVPPMATKKAEPADLQGMLLKNPEAPNSHEASEDDVDASEPMYGCDICGAAYTMEVLLQNHRLRDHN
IRPGEDDGSRKKAEFIKGSHKCNVCSRTFFSENGLREHLQTHRGPAKHYMCPICGERFPSLLTLTEHKVT
HSKSLDTGTCRICKMPLQSEEEFIEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKLAGSS
AASSPNGQGLQKLYKCALCLKEFRSKQDLVKLDVNGLPYGLCAGCMARSANGQVGGLAPPEPADRPCAGL
RCPECSVKFESAEDLESHMQVDHRDLTPETSGPRKGTQTSPVPRKKTYQCIKCQMTFENEREIQIHVANH
MIEEGINHECKLCNQMFDSPAKLLCHLIEHSFEGMGGTFKCPVCFTVFVQANKLQQHIFAVHGQEDKIYD
CSQCPQKFFFQTELQNHTMSQHAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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