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Report for CCDS3048.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3048.1 Public Homo sapiens 3 DNAJB8 24 110 108 CCDS HistoryNCBI Gene:165721Re-query CCDS DB by CCDS ID:3048.1Re-query CCDS DB by GeneID:165721See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3048.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319153.4 ENSP00000316053.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319153.4Link to Ensembl Protein Viewer:ENSP00000316053.3Re-query CCDS DB by Nucleotide ID:ENST00000319153Re-query CCDS DB by Protein ID:ENSP00000316053
Original member Current member EBI ENST00000469083.1 ENSP00000417418.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000469083.1Link to Ensembl Protein Viewer:ENSP00000417418.1Re-query CCDS DB by Nucleotide ID:ENST00000469083Re-query CCDS DB by Protein ID:ENSP00000417418
Original member Current member NCBI NM_153330.6 NP_699161.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153330.6Link to Protein Sequence:NP_699161.1Re-query CCDS DB by Nucleotide ID:NM_153330Re-query CCDS DB by Protein ID:NP_699161Link to BLAST:NP_699161.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699161.1 232 Q8NHS0 232 100% 0 0

Chromosomal Locations for CCDS 3048.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 128462547 128463245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (699 nt):
ATGGCTAACTACTACGAAGTGCTGGGCGTGCAGGCCAGCGCTTCCCCGGAGGACATCAAGAAAGCCTACC
GCAAGCTGGCCCTTCGTTGGCACCCCGACAAGAACCCTGACAATAAGGAGGAGGCGGAGAAGAAGTTCAA
GCTGGTGTCTGAGGCCTATGAGGTTCTGTCTGACTCCAAGAAACGCTCCCTGTATGACCGTGCTGGCTGT
GACAGCTGGCGGGCTGGTGGCGGGGCCAGCACGCCCTACCACAGCCCCTTCGACACCGGCTACACCTTCC
GTAACCCTGAGGACATCTTCCGGGAGTTTTTTGGTGGCCTGGACCCTTTCTCCTTTGAGTTCTGGGACAG
CCCATTCAATAGTGACCGTGGTGGCCGGGGCCATGGCCTGAGGGGGGCCTTCTCGGCAGGCTTTGGAGAA
TTTCCGGCCTTCATGGAGGCCTTCTCATCCTTCAACATGCTGGGCTGCAGCGGGGGCAGCCACACCACCT
TCTCATCCACCTCCTTCGGGGGCTCCAGTTCTGGCAGCTCGGGGTTCAAGTCGGTGATGTCGTCCACCGA
GATGATCAATGGCCACAAGGTCACCACCAAGCGCATCGTGGAGAACGGGCAGGAGCGCGTGGAGGTGGAG
GAAGACGGGCAGCTCAAGTCGGTGACTGTGAACGGCAAGGAGCAGCTCAAATGGATGGACAGCAAGTAG

Translation (232 aa):
MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC
DSWRAGGGASTPYHSPFDTGYTFRNPEDIFREFFGGLDPFSFEFWDSPFNSDRGGRGHGLRGAFSAGFGE
FPAFMEAFSSFNMLGCSGGSHTTFSSTSFGGSSSGSSGFKSVMSSTEMINGHKVTTKRIVENGQERVEVE
EDGQLKSVTVNGKEQLKWMDSK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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