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Report for CCDS29744.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29744.1 Public Mus musculus 19 Dkk1 23 108 98 CCDS HistoryNCBI Gene:13380Re-query CCDS DB by CCDS ID:29744.1Re-query CCDS DB by GeneID:13380See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29744.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025803.8 ENSMUSP00000025803.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025803.8Link to Ensembl Protein Viewer:ENSMUSP00000025803.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000025803Re-query CCDS DB by Protein ID:ENSMUSP00000025803
Original member Current member NCBI NM_010051.3 NP_034181.2 Accepted alive Link to Nucleotide Sequence:NM_010051.3Link to Protein Sequence:NP_034181.2Re-query CCDS DB by Nucleotide ID:NM_010051Re-query CCDS DB by Protein ID:NP_034181Link to BLAST:NP_034181.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034181.2 272 O54908 272 100% 0 0

Chromosomal Locations for CCDS 29744.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 30547185 30547438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30547563 30547712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30548778 30548946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30549134 30549379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (819 nt):
ATGATGGTTGTGTGTGCAGCGGCAGCTGTCCGGTTCTTGGCCGTGTTTACAATGATGGCTCTCTGCAGCC
TCCCTCTGCTAGGAGCCAGTGCCACCTTGAACTCAGTTCTCATCAATTCCAACGCGATCAAGAACCTGCC
CCCACCGCTGGGTGGTGCTGGGGGGCAGCCGGGCTCTGCTGTCAGTGTGGCGCCGGGAGTTCTCTATGAG
GGCGGGAACAAGTACCAGACTCTTGACAACTACCAGCCCTACCCTTGCGCTGAAGATGAGGAGTGCGGCT
CTGACGAGTACTGCTCCAGCCCCAGCCGCGGGGCAGCCGGCGTCGGAGGTGTACAGATCTGTCTGGCTTG
CCGAAAGCGCAGGAAGCGCTGCATGAGGCACGCTATGTGCTGCCCCGGGAACTACTGCAAAAATGGAATA
TGCATGCCCTCTGACCACAGCCATTTTCCTCGAGGGGAAATTGAGGAAAGCATCATTGAAAACCTTGGTA
ATGACCACAACGCCGCCGCGGGGGATGGATATCCCAGAAGAACCACACTGACTTCAAAAATATATCACAC
CAAAGGACAAGAAGGCTCCGTCTGCCTCCGATCATCAGACTGTGCCGCAGGGCTGTGTTGTGCAAGACAC
TTCTGGTCCAAGATCTGTAAACCTGTCCTTAAAGAAGGTCAGGTGTGCACCAAGCACAAACGGAAAGGCT
CCCACGGGCTGGAGATATTCCAGCGCTGTTACTGCGGGGAAGGCCTGGCTTGCAGGATACAGAAAGATCA
CCATCAAGCCAGCAATTCTTCTAGGCTCCACACCTGCCAGAGACACTAA

Translation (272 aa):
MMVVCAAAAVRFLAVFTMMALCSLPLLGASATLNSVLINSNAIKNLPPPLGGAGGQPGSAVSVAPGVLYE
GGNKYQTLDNYQPYPCAEDEECGSDEYCSSPSRGAAGVGGVQICLACRKRRKRCMRHAMCCPGNYCKNGI
CMPSDHSHFPRGEIEESIIENLGNDHNAAAGDGYPRRTTLTSKIYHTKGQEGSVCLRSSDCAAGLCCARH
FWSKICKPVLKEGQVCTKHKRKGSHGLEIFQRCYCGEGLACRIQKDHHQASNSSRLHTCQRH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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