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Report for CCDS27823.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27823.1 Public Mus musculus 15 Aqp5 23 108 98 CCDS HistoryNCBI Gene:11830Re-query CCDS DB by CCDS ID:27823.1Re-query CCDS DB by GeneID:11830See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27823.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000088200.12 ENSMUSP00000085530.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000088200.12Link to Ensembl Protein Viewer:ENSMUSP00000085530.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000088200Re-query CCDS DB by Protein ID:ENSMUSP00000085530
Original member Current member EBI ENSMUST00000169082.2 ENSMUSP00000127611.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169082.2Link to Ensembl Protein Viewer:ENSMUSP00000127611.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169082Re-query CCDS DB by Protein ID:ENSMUSP00000127611
Original member Current member NCBI NM_009701.4 NP_033831.1 Accepted alive Link to Nucleotide Sequence:NM_009701.4Link to Protein Sequence:NP_033831.1Re-query CCDS DB by Nucleotide ID:NM_009701Re-query CCDS DB by Protein ID:NP_033831Link to BLAST:NP_033831.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033831.1 265 Q9WTY4 265 100% 0 0

Chromosomal Locations for CCDS 27823.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 99591272 99591634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99592662 99592826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99593246 99593329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99594135 99594320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGAAGAAGGAGGTGTGTTCAGTTGCCTTCTTCAAGGCCGTGTTCGCAGAGTTCCTGGCCACCCTCATCT
TCGTCTTCTTTGGCCTGGGCTCGGCACTCAAGTGGCCCTCGGCGCTGCCCACCATTCTGCAGATCTCCAT
AGCCTTTGGCCTGGCCATAGGTACCTTGGCCCAAGCCCTGGGACCTGTGAGTGGTGGCCACATCAATCCG
GCCATTACTCTGGCCCTCTTAATAGGCAACCAGATCTCTCTGCTCCGAGCCATCTTCTACGTGGCAGCCC
AGCTGGTGGGTGCCATTGCTGGAGCAGGCATCCTGTACTGGTTGGCGCCAGGCAATGCCCGGGGTAACCT
GGCCGTCAATGCGCTCAGCAACAACACAACACCAGGCAAGGCCGTGGTGGTGGAGTTAATCTTGACTTTC
CAGCTGGCCCTCTGCATCTTCTCCTCCACGGACTCCCGCCGCACCAGCCCGGTGGGCTCCCCAGCCTTAT
CCATTGGCTTGTCGGTCACACTGGGCCATCTTGTGGGGATCTACTTCACCGGCTGTTCCATGAACCCAGC
CCGATCTTTCGGCCCTGCGGTGGTCATGAATCGGTTCAGCCCCTCTCACTGGGTCTTCTGGGTAGGACCG
ATCGTGGGGGCCGTCCTGGCTGCAATCCTCTACTTCTACTTGCTTTTCCCCTCCTCGCTGAGCCTCCACG
ACCGTGTGGCTGTGGTCAAAGGCACATATGAGCCAGAGGAGGACTGGGAAGATCATAGAGAGGAGCGGAA
GAAGACCATCGAGCTGACGGCACACTGA

Translation (265 aa):
MKKEVCSVAFFKAVFAEFLATLIFVFFGLGSALKWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINP
AITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLAVNALSNNTTPGKAVVVELILTF
QLALCIFSSTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGP
IVGAVLAAILYFYLLFPSSLSLHDRVAVVKGTYEPEEDWEDHREERKKTIELTAH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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