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Report for CCDS21949.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21949.1 Public Mus musculus 7 Mapk1ip1 23 108 98 CCDS HistoryNCBI Gene:69546Re-query CCDS DB by CCDS ID:21949.1Re-query CCDS DB by GeneID:69546See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21949.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075667.4 ENSMUSP00000075090.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075667.4Link to Ensembl Protein Viewer:ENSMUSP00000075090.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000075667Re-query CCDS DB by Protein ID:ENSMUSP00000075090
Original member Current member EBI ENSMUST00000119664.1 ENSMUSP00000112631.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119664.1Link to Ensembl Protein Viewer:ENSMUSP00000112631.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119664Re-query CCDS DB by Protein ID:ENSMUSP00000112631
Original member Current member EBI ENSMUST00000118810.1 ENSMUSP00000113813.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118810.1Link to Ensembl Protein Viewer:ENSMUSP00000113813.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118810Re-query CCDS DB by Protein ID:ENSMUSP00000113813
Original member Current member NCBI NM_001045483.1 NP_001038948.1 Accepted alive Link to Nucleotide Sequence:NM_001045483.1Link to Protein Sequence:NP_001038948.1Re-query CCDS DB by Nucleotide ID:NM_001045483Re-query CCDS DB by Protein ID:NP_001038948Link to BLAST:NP_001038948.1
Original member Current member NCBI NM_027115.2 NP_081391.1 Accepted alive Link to Nucleotide Sequence:NM_027115.2Link to Protein Sequence:NP_081391.1Re-query CCDS DB by Nucleotide ID:NM_027115Re-query CCDS DB by Protein ID:NP_081391Link to BLAST:NP_081391.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001038948.1 263 Q9D7G9 263 100% 0 0
NP_081391.1 263 Q9D7G9 263 100% 0 0

Chromosomal Locations for CCDS 21949.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 138835908 138836699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGTATCCCTTCATCCCTCCAGCTAGACTACTACCAGGATCTCCAGCACCCTTTCTTCCTTCTGGACCAT
CGTGTCCCCAACCCAGTGGTCCATATCCAGGCCCTGCTGTACGAGTCCCTGGCCCCACAAGGTCATATGT
TTCAACAAATGTGCCCTTTCCAGAGCTACCTAGGCCAAATAGCGCACCCACAGATCCAGTTGGTCCTTTA
GGTACACAGGGATCCATGTCTTCTGGACCTTGGGCACCAGGAATGGGAGGGCAGCATCCTAATGTGCCAT
ATCTATTTCCAGAGTCATCTCCCACTCCTCCTCTTCCAGTGTCAGGAGCACCACCTGTTGCATGGGTCAC
AGTGCCACCGGGGGCCTGGGAACCACCAGCGCAGTATCCTACTCCTGAAGCGTCATATCCCAGCCCAGGA
CTCCAGCCTTCCCCGAATAATCCTTACCCACTGCCGCCAGGACCTTCTGCTGCTTCACCAGGGCCTGGTA
GCCTCCATAGAATGAATGAAATCCCGGGTGGCTCCCCTTCCGATTCGTCCAACCCGGAGAGCACCTTGGA
GAGCACTGGACAAAAGAAGCACCTGAAGCTAGACAACAAATCCATCAAGAGGAGACGATCCAAGAAGAAA
AGCAAGCGGGTAACCTGGGGAGACATCAAGACTTTAACTCACAAAGCTGAAAGCTTGGGGAAACAACAAG
GACACAATACCACTGACCCCAAAATGATGCTGCTATGTTTAATGACTATGCTACATGTTAATTCTCAGCA
TGAAAGTGAAGGGTCTAAATGA

Translation (263 aa):
MYPFIPPARLLPGSPAPFLPSGPSCPQPSGPYPGPAVRVPGPTRSYVSTNVPFPELPRPNSAPTDPVGPL
GTQGSMSSGPWAPGMGGQHPNVPYLFPESSPTPPLPVSGAPPVAWVTVPPGAWEPPAQYPTPEASYPSPG
LQPSPNNPYPLPPGPSAASPGPGSLHRMNEIPGGSPSDSSNPESTLESTGQKKHLKLDNKSIKRRRSKKK
SKRVTWGDIKTLTHKAESLGKQQGHNTTDPKMMLLCLMTMLHVNSQHESEGSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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