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Report for CCDS20043.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20043.1 Public Mus musculus 6 Prss3b 23 108 98 CCDS HistoryNCBI Gene:67373Re-query CCDS DB by CCDS ID:20043.1Re-query CCDS DB by GeneID:67373See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20043.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031931.5 ENSMUSP00000031931.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031931.5Link to Ensembl Protein Viewer:ENSMUSP00000031931.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000031931Re-query CCDS DB by Protein ID:ENSMUSP00000031931
Original member Current member NCBI NM_023333.4 NP_075822.3 Accepted alive Link to Nucleotide Sequence:NM_023333.4Link to Protein Sequence:NP_075822.3Re-query CCDS DB by Nucleotide ID:NM_023333Re-query CCDS DB by Protein ID:NP_075822Link to BLAST:NP_075822.3

Chromosomal Locations for CCDS 20043.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 41031635 41031784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41032305 41032441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41032942 41033195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41034244 41034406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41035439 41035478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGAAGACCTTAATCTTCCTTGCCTTCCTTGGAGCTGCTGTTGCTCTCCCCCTGGATGATGATGATGACA
AA
ATTGTTGGAGGCTACACCTGCCAGAGGAATGCTCTCCCCTACCAGGTGTCTCTGAACAGCGGCTACCA
T
TTTTGTGGAGGCTCACTCATCAATTCCCAGTGGGTTGTTTCAGCCGCTCACTGCTACAAATCCCGAATT
CAG
GTGCGCCTGGGAGAACACAACATTGATGCCCTTGAGGGTGGTGAGCAATTCATTGATGCAGCTAAAA
TC
ATCCGCCACCCCAACTATAATGCAAACACCTATAACAATGACATCATGTTGATTAAGCTGAAGACAGC
T
GCCACCCTCAACTCTCGAGTGTCCACTGTCGCTCTGCCAAGATCTTGTCCATCAGCTGGTACTAGGTGT
CTT
GTGTCTGGCTGGGGCAACACCCTGAGCTCTGGCACCAACTACCCTTCACTCCTTCAGTGTCTTGATG
CT
CCTGTCCTCTCTGACAGTTCTTGCACAAGTTCTTACCCAGGCAAGATCACTAGCAACATGTTCTGTCT
G
GGCTTCCTGGAGGGCGGAAAGGACTCCTGCCAGGGTGACTCTGGTGGCCCCGTAGTCTGCAATGGACAA
CTC
CAGGGTGTTGTTTCCTGGGGTTATGGCTGTGCTCAGAGAGGAAAACCTGGTGTCTACACCAAGGTGT
GC
AAGTATGTGAACTGGATTCAGCAGACCATCGCTGCCAACTAA


Translation (247 aa):
MKTLIFLAFLGAAVALPLDDDDDKIVGGYTCQRNALPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSRI
Q
VRLGEHNIDALEGGEQFIDAAKIIRHPNYNANTYNNDIMLIKLKTAATLNSRVSTVALPRSCPSAGTRC
L
VSGWGNTLSSG
TNYPSLLQCLDAPVLSDSSCTSSYPGKITSNMFCLGFLEGGKDSCQGDSGGPVVCNGQ
L
QGVVSWGYGCAQRGKPGVYTKVCKYVNWIQQTIAAN




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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