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Report for CCDS16511.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16511.1 Public Mus musculus 2 Fibin 23 108 98 CCDS HistoryNCBI Gene:67606Re-query CCDS DB by CCDS ID:16511.1Re-query CCDS DB by GeneID:67606See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 16511.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099626.4 ENSMUSP00000097221.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099626.4Link to Ensembl Protein Viewer:ENSMUSP00000097221.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000099626Re-query CCDS DB by Protein ID:ENSMUSP00000097221
Original member Current member NCBI NM_026271.1 NP_080547.1 Accepted alive Link to Nucleotide Sequence:NM_026271.1Link to Protein Sequence:NP_080547.1Re-query CCDS DB by Nucleotide ID:NM_026271Re-query CCDS DB by Protein ID:NP_080547Link to BLAST:NP_080547.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080547.1 217 Q9CQS3 217 100% 0 0

Chromosomal Locations for CCDS 16511.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 110362142 110362795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (654 nt):
ATGGTGTTCCCGAAGTTGATCTGGATGGGTTTCTTTTGCCACCTGTGTCGAGGCTACTTTGATGGCCCCC
TGTACCCAGAAATGTCTAATGGGACTTTGCATCATTACTTCGTGCCTGATGGAGACTATGAGGAGAATGA
TGACCCCGAGAAATGCCAGCTGCTCTTCAGGGTGAGTGATCGCAGGCGCTGCTCCCAGGGGGAAGGGGGC
CAAGCCAGTAGCTTGCTGAGCCTCACTCTTCGAGAGGAGTTCACAGTACTGGGCCGCCAGGTGGAGGATG
CTGGACGCGTCCTGGAGGGCATCAGCAAGAGCATCTCCTACGACCTGGATGGGGAAGAGAGCTATGGCAA
GTACCTGAGGCGGGAGTCCCACCAGATCGGGGATGCCTACTCCAACTCTGACAAGTCCCTCACTGAGCTG
GAAAGCAAGTTCAAGCAGGGCCAAGAGCAGGATAGCCGGCAGGAAAGCAGACTCAATGAGGACTTCCTGG
GGATGCTGGTCCACACCAGGTCCTTGCTGAAGGAGACACTGGACATCTCTGTGGGGCTCAGAGACAAATA
CGAGCTGCTGGCACATACCATCAGGAGCCATGGGACCCGCTTAGGTCGACTGAAAAGCGACTATCTGGAG
GGTGGGGCACAGAAGACAGGCTAA

Translation (217 aa):
MVFPKLIWMGFFCHLCRGYFDGPLYPEMSNGTLHHYFVPDGDYEENDDPEKCQLLFRVSDRRRCSQGEGG
QASSLLSLTLREEFTVLGRQVEDAGRVLEGISKSISYDLDGEESYGKYLRRESHQIGDAYSNSDKSLTEL
ESKFKQGQEQDSRQESRLNEDFLGMLVHTRSLLKETLDISVGLRDKYELLAHTIRSHGTRLGRLKSDYLE
GGAQKTG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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