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Report for CCDS16198.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16198.1 Public Mus musculus 2 Prg2 23 108 98 CCDS HistoryNCBI Gene:19074Re-query CCDS DB by CCDS ID:16198.1Re-query CCDS DB by GeneID:19074See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 16198.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028467.5 ENSMUSP00000028467.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028467.5Link to Ensembl Protein Viewer:ENSMUSP00000028467.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000028467Re-query CCDS DB by Protein ID:ENSMUSP00000028467
Original member Current member NCBI NM_008920.4 NP_032946.1 Accepted alive Link to Nucleotide Sequence:NM_008920.4Link to Protein Sequence:NP_032946.1Re-query CCDS DB by Nucleotide ID:NM_008920Re-query CCDS DB by Protein ID:NP_032946Link to BLAST:NP_032946.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032946.1 223 Q61878 223 100% 0 0

Chromosomal Locations for CCDS 16198.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 84981338 84981395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84982006 84982316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84982589 84982720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84983163 84983274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 84983460 84983518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGAAATTCCCTCTACTTCTGGCTCTTCTAGTCGGGGGAGCGTCTGCTCTTCATCTGAGCTCTGAAACTT
CTGACTCCAAAAGCCCATTGATGGATGAGAACTTGCCTAGGGATGCAGAGATATCAGGACCAGAAGGAGA
AGAGTGTCCTCCAGGGGAAGAGCTAATGCCACTGGAGGGGGAGAAGGAAGAAGGTTCTGGAAGTGAAGGT
GTTCCTGGGGATGAAGGAGCTGTCTCAGGTCAGGATGTGACAGACGTGGACCTTCAGTGCCCCAAGGAAG
AGGACACAACAAGTCTTATGGGTGACTCTGGATGCAAGACCTGTCGCTACCTCCTAGTCAGGAGGGCTGA
ATGCTTTGACAAAGCTCAGTCAGTTTGCCGGCGCTGCTACCGGGGCACCCTCGCCTCCATCCACAGTTTC
AGTGTTAACTTCGGAATCCAGTCCGCTGTCAGGGGAATCAACCAGGGTCAAGTCTGGATTGGAGGCAGGA
TCAAGGGCTGGGGCCGATGCAAACGCTTTCGATGGGTTGATGGAAGTTCTTGGAATTTTGCATACTGGGC
TGCTGGGCAGCCTTGCCCTGGTGGTGGCAGATGTGTGACCCTGTGTACTCAAGGAGGCCACTGGCGTCTA
TCTCACTGTGTCAAGAGACGTCCCTTCATCTGTTCGTATTGA

Translation (223 aa):
MKFPLLLALLVGGASALHLSSETSDSKSPLMDENLPRDAEISGPEGEECPPGEELMPLEGEKEEGSGSEG
VPGDEGAVSGQDVTDVDLQCPKEEDTTSLMGDSGCKTCRYLLVRRAECFDKAQSVCRRCYRGTLASIHSF
SVNFGIQSAVRGINQGQVWIGGRIKGWGRCKRFRWVDGSSWNFAYWAAGQPCPGGGRCVTLCTQGGHWRL
SHCVKRRPFICSY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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