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Report for CCDS15965.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15965.2 Public Mus musculus 2 Dab2ip 23 108 98 CCDS HistoryNCBI Gene:69601Re-query CCDS DB by CCDS ID:15965.2Re-query CCDS DB by GeneID:69601See the combined annotation on chromosome 2 in Sequence Viewer

Public Note for CCDS 15965.1
The coding region has been updated to extend the N-terminus to one that is supported by available conservation and transcript data.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 15965.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065001.11 ENSMUSP00000068832.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065001.11Link to Ensembl Protein Viewer:ENSMUSP00000068832.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000065001Re-query CCDS DB by Protein ID:ENSMUSP00000068832
Original member Current member NCBI NM_001001602.2 NP_001001602.2 Accepted alive Link to Nucleotide Sequence:NM_001001602.2Link to Protein Sequence:NP_001001602.2Re-query CCDS DB by Nucleotide ID:NM_001001602Re-query CCDS DB by Protein ID:NP_001001602Link to BLAST:NP_001001602.2

Chromosomal Locations for CCDS 15965.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 35692244 35692410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35707648 35707801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35708814 35708912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35709818 35710372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35712866 35713010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35713106 35713250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35715269 35715505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35717071 35717272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35718760 35718938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35719853 35720741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35721261 35721413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35723029 35723222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35727426 35727513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 35728058 35728225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3375 nt):
ATGGGCCTCTGTGGCCTTGGACTCCTCGGTGACAACCTTGGCAAGATCCTGTGCTGGTCTGGAGGTGCCA
CTCTCTGGAGGCCCAGCCATCCTCGGAAGCCTCATCTGGCTGCTGGGCCTCAGATGCCCAGGTCAGCAGA
GAGGCCTACACTCCTATCGTTGCCAAGGTCCCATCTGATGCCAAGGCTGAAGGAGTCTCGGTCACACGAG
TCCCTGCTCAGCCCCAGCAGCGCAGTGGAGGCCCTGGACCTCAGCATGGAGGAGGAGGTGATTATCAAGC
CCGTTCACAGCAGCATCCTGGGTCAGGACTACTGCTTCGAGGTGACAACATCATCAGGAAGCAAGTGTTT
TTCCTGCCGGTCAGCCGCTGAGCGCGATAAGTGGATGGAGAACCTGAGGCGAGCAGTGCACCCCAACAAG
GACAACAGCCGGCGTGTGGAGCATATCCTGAAGCTGTGGGTGATTGAGGCCAAGGATCTGCCGGCCAAGA
AGAAGTATCTATGTGAACTGTGCCTGGACGATGTGCTGTATGCCCGTACCACAAGCAAGCTCAAGACGGA
CAATGTCTTCTGGGGAGAGCACTTTGAGTTCCATAACCTGCCGCCTCTACGCACAGTCACTGTGCACCTG
TATCGGGAGACTGACAAGAAAAAGAAAAAGGAACGCAACAGCTACCTGGGCCTGGTGAGCCTGCCTGCCG
CCTCTGTGGCTGGGCGGCAGTTTGTGGAGAAGTGGTACCCAGTGGTGACACCCAACCCCAAGGGTGGCAA
AGGCCCTGGGCCCATGATCCGAATCAAGGCACGCTACCAGACCGTCAGCATCTTGCCTATGGAGATGTAC
AAGGAGTTTGCGGAGCACATCACTAACCACTACCTGGGGCTGTGCGCAGCCCTGGAACCCATCCTCAGTG
CCAAGACCAAGGAGGAGATGGCGTCGGCTCTGGTGCACATCCTGCAGAGCACGGGAAAGGTGAAGGACTT
TCTAACAGACCTGATGATGTCAGAGGTGGACCGCTGTGGGGACAATGAGCACCTCATCTTCCGGGAGAAC
ACACTGGCCACCAAGGCCATCGAGGAATACCTCAAACTTGTGGGCCAGAAGTACCTGCAGGACGCACTAG
GTGAGTTCATCAAAGCTCTGTATGAGTCAGATGAAAATTGTGAAGTGGACCCAAGCAAGTGCTCATCCGC
TGACCTCCCTGAGCACCAGGGCAACCTCAAGATGTGCTGTGAGCTGGCCTTCTGCAAGATCATCAACTCC
TACTGCGTCTTCCCACGGGAGCTTAAGGAGGTGTTCGCCTCATGGCGGCAGGAGTGTAGCAGCCGAGGCC
GGCCAGATATCAGTGAACGGCTCATCAGCGCCTCCCTCTTCCTTCGCTTCCTGTGCCCTGCCATCATGTC
ACCCTCGCTCTTCAACCTGCTTCAGGAGTATCCTGACGACCGCACGGCTCGCACCCTCACGCTCATTGCC
AAAGTCACCCAGAACCTGGCCAACTTTGCCAAGTTTGGCAGCAAGGAAGAATACATGTCCTTCATGAACC
AGTTCCTGGAGCACGAGTGGACCAACATGCAGCGCTTCCTGTTGGAGATCTCCAACCCCGAGACCCTTTC
CAACACAGCAGGCTTCGAGGGCTACATAGACCTGGGCCGGGAGCTCTCTAGCCTGCACTCCCTGCTCTGG
GAAGCTGTCAGCCAGCTTGATCAGAGCGTTGTGTCGAAGCTGGGACCTCTGCCTCGTATCCTGAGGGATG
TCCACACAGCACTGAGCACTCCTGGCAGTGGGCAGCTCCCTGGCACCAATGACCTGGCCTCCACCCCGGG
CTCCGGCAGCAGCAGCGTCTCTGCTGGGCTTCAGAAGATGGTGATTGAAAATGACCTCTCTGGTCTGATA
GATTTCACCCGGTTACCGTCTCCAACCCCCGAAAACAAGGACTTGTTTTTTGTCACAAGGTCCTCCGGGG
TCCAGCCTTCACCTGCCCGCAGCTCAAGCTACTCAGAAGCCAATGAACCTGACCTGCAGATGGCCAATGG
CAGCAAGAGCCTGTCCATGGTGGACCTCCAGGACGCCCGCACGCTGGATGGGGAGGCAGGTTCCCCAGTG
GGCCCAGACGCCCTACCTGCTGACGGGCAGGTGCCTGCGACTCAGCTGCTGGCTGGGTGGCCAGCCAGGG
CAGCCCCAGTGAGCCTGGCAGGATTGGCCACAGTGCGGCGGGCAGTGCCAACACCAACCACACCAGGCAC
CTCCGAGGGTGCACCAGGACGGCCCCAGTTGTTGGCCCCACTTTCCTTCCAGAATCCTGTGTACCAGATG
GCGGCCGGCCTGCCACTGTCACCCCGTGGCCTTGGTGACTCAGGCTCTGAAGGCCACAGCTCCCTGAGCT
CTCACAGCAACAGTGAAGAGCTGGCAGCCGCTGCCAAACTAGGAAGTTTCAGCACTGCTGCAGAGGAGCT
GGCAAGGCGGCCTGGAGAACTGGCACGGAGGCAGATGTCACTGACTGAGAAGGGTGGGCAGCCCACAGTG
CCGAGGCAAAATAGTGCCGGTCCCCAGCGGAGGATTGACCAGCCGCCACCGCCACCACCACCACCGCCTC
CTGCTCCCCGGGGCAGGACACCTCCTACCCTGCTGAGCACCCTACAGTACCCACGACCCTCAAGTGGAAC
CCTGGCATCAGCATCCCCCGACTGGGCTGGCCCTGGCACCCGGCTGCGGCAACAGTCCTCCTCCTCCAAG
GGAGACAGCCCAGAGCTGAAGCCCCGAGCCATGCACAAGCAGGGCCCTTCACCCGTCAGTCCCAATGCCC
TGGACCGCACGGCCGCTTGGCTCTTGACCATGAACGCGCAGTTGTTAGAAGACGAGGGTCTGGGCCCAGA
TCCCCCCCACAGGGATAGGCTAAGGAGTAAGGAGGAACTCAGCCAAGCAGAAAAGGATCTGGCAGTGCTA
CAAGACAAGCTACGGATCTCCACCAAGAAGCTGGAGGAGTATGAGACCCTATTCAAGTGCCAGGAGGAGA
CGACGCAGAAGCTGGTGCTGGAGTATCAGGCTCGGCTGGAAGAAGGTGAGGAGCGGCTGCGGCGGCAGCA
GGAAGACAAGGATATCCAGATGAAAGGCATCATCAGCAGGTTGATGTCAGTGGAAGAAGAACTGAAGAAG
GATCATGCAGAGATGCAAGCAGCTGTAGATTCCAAACAGAAGATCATCGATGCCCAGGAAAAGCGCATTG
CCTCGCTGGATGCTGCCAATGCCCGCCTCATGAGTGCCCTCACACAGCTGAAAGAGAGGTACAGCATGCA
AGCCCGTAACGGCGTCTCCCCCACCAACCCCACCAAATTGCAGATTACTGAGAACGGCGAGTTCAGAAAC
AGCAGCAATTGTTAA

Translation (1124 aa):
MGLCGLGLLGDNLGKILCWSGGATLWRPSHPRKPHLAAGPQMPRSAERPTLLSLPRSHLMPRLKESRSHE
SLLSPSSAVEALDLSMEEEVIIKPVHSSILGQDYCFEVTTSSGSKCFSCRSAAERDKWMENLRRAVHPNK
DNSRRVEHILKLWVIEAKDLPAKKKYLCELCLDDVLYARTTSKLKTDNVFWGEHFEFHNLPPLRTVTVHL
YRETDKKKKKERNSYLGLVSLPAASVAGRQFVEKWYPVVTPNPKGGKGPGPMIRIKARYQTVSILPMEMY
KEFAEHITNHYLGLCAALEPILSAKTKEEMASALVHILQSTGKVKDFLTDLMMSEVDRCGDNEHLIFREN
TLATKAIEEYLKLVGQKYLQDALGEFIKALYESDENCEVDPSKCSSADLPEHQGNLKMCCELAFCKIINS
YCVFPRELKEVFASWRQECSSRGRPDISERLISASLFLRFLCPAIMSPSLFNLLQEYPDDRTARTLTLIA
KVTQNLANFAKFGSKEEYMSFMNQFLEHEWTNMQRFLLEISNPETLSNTAGFEGYIDLGRELSSLHSLLW
EAVSQLDQSVVSKLGPLPRILRDVHTALSTPGSGQLPGTNDLASTPGSGSSSVSAGLQKMVIENDLSGLI
DFTRLPSPTPENKDLFFVTRSSGVQPSPARSSSYSEANEPDLQMANGSKSLSMVDLQDARTLDGEAGSPV
GPDALPADGQVPATQLLAGWPARAAPVSLAGLATVRRAVPTPTTPGTSEGAPGRPQLLAPLSFQNPVYQM
AAGLPLSPRGLGDSGSEGHSSLSSHSNSEELAAAAKLGSFSTAAEELARRPGELARRQMSLTEKGGQPTV
PRQNSAGPQRRIDQPPPPPPPPPPAPRGRTPPTLLSTLQYPRPSSGTLASASPDWAGPGTRLRQQSSSSK
GDSPELKPRAMHKQGPSPVSPNALDRTAAWLLTMNAQLLEDEGLGPDPPHRDRLRSKEELSQAEKDLAVL
QDKLRISTKKLEEYETLFKCQEETTQKLVLEYQARLEEGEERLRRQQEDKDIQMKGIISRLMSVEEELKK
DHAEMQAAVDSKQKIIDAQEKRIASLDAANARLMSALTQLKERYSMQARNGVSPTNPTKLQITENGEFRN
SSNC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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