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Report for CCDS15476.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15476.1 Public Mus musculus 1 Fcgr4 23 108 98 CCDS HistoryNCBI Gene:246256Re-query CCDS DB by CCDS ID:15476.1Re-query CCDS DB by GeneID:246256See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15476.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000078825.4 ENSMUSP00000077873.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000078825.4Link to Ensembl Protein Viewer:ENSMUSP00000077873.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000078825Re-query CCDS DB by Protein ID:ENSMUSP00000077873
Original member Current member NCBI NM_144559.2 NP_653142.2 Accepted alive Link to Nucleotide Sequence:NM_144559.2Link to Protein Sequence:NP_653142.2Re-query CCDS DB by Nucleotide ID:NM_144559Re-query CCDS DB by Protein ID:NP_653142Link to BLAST:NP_653142.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653142.2 249 A0A0B4J1G0 249 100% 0 0

Chromosomal Locations for CCDS 15476.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 171018980 171019019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171019528 171019548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171019896 171020150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171025544 171025798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171029137 171029315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGTGGCAGCTACTACTACCAACAGCTCTGGTACTTACAGCTTTCTCTGGCATTCAAGCTGGTCTCCAAA
AGGCTGTGGTGAACCTAGACCCCAAGTGGGTCAGGGTGCTTGAGGAAGACAGCGTGACCCTCAGATGCCA
AGGCACTTTCTCCCCCGAGGACAATTCTATCAAGTGGTTCCATAACGAAAGCCTCATCCCACACCAGGAT
GCCAACTATGTCATCCAAAGTGCCAGAGTTAAGGACAGTGGAATGTACAGGTGCCAGACAGCCCTCTCCA
CGATCAGTGACCCAGTGCAACTAGAGGTCCATATGGGCTGGCTATTGCTTCAGACCACTAAGTGGCTGTT
CCAGGAGGGGGACCCCATTCATCTGAGATGCCACAGTTGGCAAAACAGACCTGTACGGAAGGTCACCTAT
TTACAGAACGGCAAAGGCAAGAAGTATTTCCATGAAAATTCTGAATTACTCATTCCAAAAGCTACACACA
ATGACAGTGGCTCCTACTTCTGCAGAGGGCTCATTGGACACAACAACAAATCTTCAGCATCCTTTCGTAT
AAGCCTAGGCGATCCAGGGTCTCCATCCATGTTTCCACCGTGGCATCAAATCACATTCTGCCTGCTGATA
GGACTCTTGTTTGCAATAGACACAGTGCTGTATTTCTCTGTGCGGAGGGGTCTTCAAAGTCCTGTGGCTG
ACTATGAGGAACCCAAGATTCAATGGAGCAAGGAACCTCAGGACAAGTGA

Translation (249 aa):
MWQLLLPTALVLTAFSGIQAGLQKAVVNLDPKWVRVLEEDSVTLRCQGTFSPEDNSIKWFHNESLIPHQD
ANYVIQSARVKDSGMYRCQTALSTISDPVQLEVHMGWLLLQTTKWLFQEGDPIHLRCHSWQNRPVRKVTY
LQNGKGKKYFHENSELLIPKATHNDSGSYFCRGLIGHNNKSSASFRISLGDPGSPSMFPPWHQITFCLLI
GLLFAIDTVLYFSVRRGLQSPVADYEEPKIQWSKEPQDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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