NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS14929.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14929.1 Public Mus musculus 1 Poglut2 23 108 98 CCDS HistoryNCBI Gene:72050Re-query CCDS DB by CCDS ID:14929.1Re-query CCDS DB by GeneID:72050See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 14929.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000065767.8 ENSMUSP00000064500.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000065767.8Link to Ensembl Protein Viewer:ENSMUSP00000064500.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000065767Re-query CCDS DB by Protein ID:ENSMUSP00000064500
Original member Current member NCBI NM_023645.3 NP_076134.1 Accepted alive Link to Nucleotide Sequence:NM_023645.3Link to Protein Sequence:NP_076134.1Re-query CCDS DB by Nucleotide ID:NM_023645Re-query CCDS DB by Protein ID:NP_076134Link to BLAST:NP_076134.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076134.1 502 Q9JHP7-1 502 100% 0 0

Chromosomal Locations for CCDS 14929.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 44107087 44107104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44107765 44107872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44109994 44110083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44110735 44110944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44112645 44112882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44113003 44113175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44114441 44114518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44114694 44114899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44117038 44117243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44118318 44118499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1509 nt):
ATGTTCAGCATTTCGCTGCTTTCCTGCCTTTTTCTGGGGACTGTGCCAGCACTTGCCCAGACCGGCGGAG
AGAGGAGGCTGAGCCCAGAGAAGAGCGAAATATGGGGACCCGGGCTAAAAGCACACGTGGTCCTTCCTGC
CCGCTATTTCTACATTCGGGCGGTGGATACCTCAGGGGAACAGTTTACATCTTCTCCAGGTGAAAAGGTG
TTCCAGGTTAAAATCTCAGCACCCGATGAGCAGTTCACGAGAGTTGGTGTCCAGGTTTTAGATCGAAAGG
ACGGTTCCTTCATAGTAAGATACAGAATGTATGCCAGCTACAGAAATCTGAAGATAGAGGTTAAACACCA
TGGGCAACATGTTGCCGAGTCTCCTTATGTTTTAAGAGGACCAGTTTACCATGAGAACTGTGACTGTCCT
TTGGAAGACAGTGCAGCCTGGCTACGGGAGATGAACTGTTCGGAAACAATCTCTCAGATTCAGAAAGATC
TGGCACATTTCCCTACTGTTGATCCTGAAAAGATTGCAGCAGAAATCCCAAAACGATTTGGGCAGAGGCA
AAGCCTGTGTCACTATACCTTAAAGGACAATAAGGTTTATATCAAGACTCATGGTGAGCACGTTGGCTTT
AGGATTTTCATGGATGCAATACTACTTTCATTGACTAGAAAGGTGAGGATGCCAGATGTGGAATTTTTTG
TTAATTTGGGAGACTGGCCTTTGGAAAAAAAGAAATCCAACTCCAACATTCAGCCGATCTTTTCCTGGTG
TGGCTCCACAGAGTCCAGGGATATTGTGATGCCTACCTACGACCTGACTGACTCTGTTCTAGAAACCATG
GGCCGAGTAAGTCTGGATATGATGTCGGTGCAAGCTAACACAGGGCCTCCCTGGGAAAGTAAGAATTCCA
CAGCTGTCTGGAGGGGCCGAGACAGCCGCAAAGAGAGACTAGAGCTGGTGAAGCTTAGCAGAAAACACCC
AGAGCTCATCGATGCTGCTTTCACAAATTTTTTCTTCTTTAAACATGACGAAAGCCTGTATGGGCCCATC
GTGAAACACATTTCATTTTTTGATTTCTTCAAGCACAAGTATCAGATAAATATTGATGGCACTGTGGCAG
CGTACCGATTGCCCTACCTGCTGGTGGGTGACAGTGTCGTTCTGAAGCAGGACTCCATCTACTATGAACA
CTTTTACAATGAGCTGCAGCCCTGGAAACATTACATTCCAGTCAAAAGTAACCTAAGCGATCTGCTAGAA
AAGCTCAAGTGGGCAAAAGAGCATGATGCAGAGGCCAAGAAGATAGCAAAAGCAGGACAAGAATTTGCGA
GAAATAATCTAATGGGTGATGATATATTCTGTTATTACTTCAAACTGTTCCAGGGCTATGCAAATTTACA
AGTGAGCGAGCCCCAAATTCGAGAGGGTATGAAGAGGGTAGAGCCACAATCCGAGGATGACCTCTTCCCT
TGCACGTGCCATAGGAGAAAGGCCAAAGATGAACTCTGA

Translation (502 aa):
MFSISLLSCLFLGTVPALAQTGGERRLSPEKSEIWGPGLKAHVVLPARYFYIRAVDTSGEQFTSSPGEKV
FQVKISAPDEQFTRVGVQVLDRKDGSFIVRYRMYASYRNLKIEVKHHGQHVAESPYVLRGPVYHENCDCP
LEDSAAWLREMNCSETISQIQKDLAHFPTVDPEKIAAEIPKRFGQRQSLCHYTLKDNKVYIKTHGEHVGF
RIFMDAILLSLTRKVRMPDVEFFVNLGDWPLEKKKSNSNIQPIFSWCGSTESRDIVMPTYDLTDSVLETM
GRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLELVKLSRKHPELIDAAFTNFFFFKHDESLYGPI
VKHISFFDFFKHKYQINIDGTVAAYRLPYLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLE
KLKWAKEHDAEAKKIAKAGQEFARNNLMGDDIFCYYFKLFQGYANLQVSEPQIREGMKRVEPQSEDDLFP
CTCHRRKAKDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH