NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Tuesday, June 4, 2024, starting at 8:00 a.m. EDT for up to 60 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS1432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1432.1 Public Homo sapiens 1 TMEM183A 24 110 108 CCDS HistoryNCBI Gene:92703Re-query CCDS DB by CCDS ID:1432.1Re-query CCDS DB by GeneID:92703See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1432.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367242.4 ENSP00000356211.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367242.4Link to Ensembl Protein Viewer:ENSP00000356211.3Re-query CCDS DB by Nucleotide ID:ENST00000367242Re-query CCDS DB by Protein ID:ENSP00000356211
Original member Current member NCBI NM_138391.6 NP_612400.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138391.6Link to Protein Sequence:NP_612400.3Re-query CCDS DB by Nucleotide ID:NM_138391Re-query CCDS DB by Protein ID:NP_612400Link to BLAST:NP_612400.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612400.3 376 Q8IXX5-1 376 100% 0 0

Chromosomal Locations for CCDS 1432.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 203007466 203007574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203007774 203007863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203008643 203008810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203014889 203015048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203015960 203016140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203018481 203018561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203020793 203020948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203022855 203023040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGGCCCGGGGGCCCGGCCCGCTAGGCAGGCCTCGCCCCGATACGGTCGCCATGCCCAAGAGAGGAAAGC
GACTCAAGTTCCGGGCCCACGACGCCTGCTCCGGCCGAGTGACCGTGGCGGATTACGCCAACTCGGATCC
GGCGGTCGTGAGGTCTGGACGAGTCAAGAAAGCCGTAGCCAACGCTGTTCAGCAGGAAGTAAAATCTCTT
TGTGGCTTGGAAGCCTCTCAGGTTCCTGCAGAGGAAGCTCTTTCTGGGGCTGGTGAGCCCTGTGACATCA
TCGACAGCAGTGATGAGATGGATGCCCAGGAGGAAAGCATCCATGAGAGAACTGTCTCCAGAAAAAAGAA
AAGCAAGAGACACAAAGAAGAACTGGACGGGGCTGGAGGAGAAGAGTATCCCATGGATATTTGGCTATTG
CTGGCCTCCTATATCCGTCCTGAGGACATTGTGAATTTTTCCCTGATTTGTAAGAATGCCTGGACTGTCA
CTTGCACTGCTGCCTTTTGGACCAGGTTGTACCGAAGGCACTACACGCTGGATGCTTCCCTGCCTTTGCG
TCTGCGACCAGAGTCAATGGAGAAGCTGCGCTGTCTCCGGGCTTGTGTGATCCGATCTCTGTACCATATG
TATGAGCCATTTGCTGCTCGAATCTCCAAGAATCCAGCCATTCCAGAAAGCACCCCCAGCACATTAAAGA
ATTCCAAATGCTTACTTTTCTGGTGCAGAAAGATTGTTGGGAACAGACAGGAACCAATGTGGGAATTCAA
CTTCAAGTTCAAAAAACAGTCCCCTAGGTTAAAGAGCAAGTGTACAGGAGGATTGCAGCCTCCCGTTCAG
TACGAAGATGTTCATACCAATCCAGACCAGGACTGCTGCCTACTGCAGGTCACCACCCTCAATTTCATCT
TTATTCCGATTGTCATGGGAATGATATTTACTCTGTTTACTATCAATGTGAGCACGGACATGCGGCATCA
TCGAGTGAGACTGGTGTTCCAAGATTCCCCTGTCCATGGTGGTCGGAAACTGCGCAGTGAACAGGGTGTG
CAAGTCATCCTGGACCCAGTGCACAGCGTTCGGCTCTTTGACTGGTGGCATCCTCAGTACCCATTCTCCC
TGAGAGCGTAG

Translation (376 aa):
MARGPGPLGRPRPDTVAMPKRGKRLKFRAHDACSGRVTVADYANSDPAVVRSGRVKKAVANAVQQEVKSL
CGLEASQVPAEEALSGAGEPCDIIDSSDEMDAQEESIHERTVSRKKKSKRHKEELDGAGGEEYPMDIWLL
LASYIRPEDIVNFSLICKNAWTVTCTAAFWTRLYRRHYTLDASLPLRLRPESMEKLRCLRACVIRSLYHM
YEPFAARISKNPAIPESTPSTLKNSKCLLFWCRKIVGNRQEPMWEFNFKFKKQSPRLKSKCTGGLQPPVQ
YEDVHTNPDQDCCLLQVTTLNFIFIPIVMGMIFTLFTINVSTDMRHHRVRLVFQDSPVHGGRKLRSEQGV
QVILDPVHSVRLFDWWHPQYPFSLRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH