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Report for CCDS12207.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12207.1 Public Homo sapiens 19 ACTL9 24 110 108 CCDS HistoryNCBI Gene:284382Re-query CCDS DB by CCDS ID:12207.1Re-query CCDS DB by GeneID:284382See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12207.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324436.5 ENSP00000316674.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324436.5Link to Ensembl Protein Viewer:ENSP00000316674.3Re-query CCDS DB by Nucleotide ID:ENST00000324436Re-query CCDS DB by Protein ID:ENSP00000316674
Original member Current member NCBI NM_178525.5 NP_848620.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178525.5Link to Protein Sequence:NP_848620.3Re-query CCDS DB by Nucleotide ID:NM_178525Re-query CCDS DB by Protein ID:NP_848620Link to BLAST:NP_848620.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848620.3 416 Q8TC94 416 100% 0 0

Chromosomal Locations for CCDS 12207.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 8697451 8698701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1251 nt):
ATGGATGCAAGTCGCCCCAAGTCCTCGGAATCCCAGTCCTCCCTGGAGGCCCCCAGGCCCGGCCCAAACC
CCAGTCCCAACGTGGTGAACAAGCCCCTGCAGCGGGACTCCCCCGGCATGGTGGCCGACAGGCTGCCACC
AAAGACCGGCGCGGTGGTTATTGACATGGGCACAGGCACCTGTAAGGTAGGTTTTGCTGGGCAGGCCAGC
CCCACCTACACCGTGGCCACCATCCTGGGCTGCCAGCCCAAGAAACCCGCCACCTCGGGGCAGTCCGGGC
TGCAGACGTTCATCGGCGAGGCAGCCCGCGTGCTCCCAGAGCTGACGCTGGTGCAACCCCTGCGCAGCGG
CATCGTCGTGGACTGGGATGCCGCCGAGCTCATCTGGCGCCACCTGCTGGAGCACGACCTCCGAGTGGCC
ACCCACGACCACCCGCTGCTGTTCTCCGACCCACCCTTCAGCCCGGCCACCAACCGCGAGAAGCTAGTGG
AGGTGGCCTTCGAGTCGCTGCGCTCCCCAGCCATGTACGTGGCATCGCAGTCGGTGCTGTCTGTCTACGC
CCACGGTCGTGTCAGCGGGCTGGTGGTGGACACGGGACACGGGGTCACCTACACAGTGCCCGTCTTCCAG
GGCTACAACCTGCTCCACGCCACGGAGCGTCTGGACCTGGCGGGCAACAACCTGACCGCCTTCCTGGCGG
AGATGCTGCTCCAGGCCGGCCTGCCCCTGGGACAGCAGGACCTGGACCTAGTGGAGAACATTAAGCACCA
CTATTGCTACGTGGCCTCCGACTTCCAGAAGGAGCAGGCCCGGCCGGAGCAGGAGTACAAGCGGACTCTG
AAGCTGCCCGATGGGCGCACGGTCACCCTGGGCAAGGAGCTGTTCCAGTGTCCGGAGCTGCTGTTCAACC
CCCCAGAGGTCCCGGGGCTGTCACCCGTCGGCCTCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTC
ACTGGAGATGCGCGCGGACTTGGCCCAAAACGTGCTTCTCTGCGGTGGGTCCTCGCTCTTCACCGGCTTC
GAGGGTCGCTTCCGGGCAGAGCTGCTGCGCGCTCTGCCAGCCGAGACCCACGTGGTGGTGGCTGCCCAGC
CCACCAGGAATTTCTCCGTATGGATCGGGGGCTCCATCCTGGCCTCCCTGCGCGCCTTCCAGTCCTGCTG
GGTCCTGCGGGAGCAGTACGAGGAACAGGGTCCCTATATCGTGTACCGCAAATGCTACTGA

Translation (416 aa):
MDASRPKSSESQSSLEAPRPGPNPSPNVVNKPLQRDSPGMVADRLPPKTGAVVIDMGTGTCKVGFAGQAS
PTYTVATILGCQPKKPATSGQSGLQTFIGEAARVLPELTLVQPLRSGIVVDWDAAELIWRHLLEHDLRVA
THDHPLLFSDPPFSPATNREKLVEVAFESLRSPAMYVASQSVLSVYAHGRVSGLVVDTGHGVTYTVPVFQ
GYNLLHATERLDLAGNNLTAFLAEMLLQAGLPLGQQDLDLVENIKHHYCYVASDFQKEQARPEQEYKRTL
KLPDGRTVTLGKELFQCPELLFNPPEVPGLSPVGLSTMAKQSLRKLSLEMRADLAQNVLLCGGSSLFTGF
EGRFRAELLRALPAETHVVVAAQPTRNFSVWIGGSILASLRAFQSCWVLREQYEEQGPYIVYRKCY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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