NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10884.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10884.1 Public Homo sapiens 16 NOB1 24 110 108 CCDS HistoryNCBI Gene:28987Re-query CCDS DB by CCDS ID:10884.1Re-query CCDS DB by GeneID:28987See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10884.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268802.10 ENSP00000268802.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268802.10Link to Ensembl Protein Viewer:ENSP00000268802.5Re-query CCDS DB by Nucleotide ID:ENST00000268802Re-query CCDS DB by Protein ID:ENSP00000268802
Original member Current member NCBI NM_014062.3 NP_054781.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014062.3Link to Protein Sequence:NP_054781.1Re-query CCDS DB by Nucleotide ID:NM_014062Re-query CCDS DB by Protein ID:NP_054781Link to BLAST:NP_054781.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054781.1 412 Q9ULX3 412 100% 0 0

Chromosomal Locations for CCDS 10884.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 69742332 69742601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 69744873 69745017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 69748232 69748329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 69748918 69749118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 69749213 69749338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 69749559 69749630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 69752241 69752371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 69754594 69754726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 69754848 69754910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1239 nt):
ATGGCTCCAGTGGAGCACGTTGTGGCGGATGCTGGGGCTTTCCTGCGGCATGCGGCTCTGCAGGACATCG
GGAAGAACATTTACACCATCCGGGAGGTGGTCACTGAGATTCGGGACAAGGCCACACGCAGGCGGCTCGC
TGTCCTGCCCTACGAGCTGCGGTTCAAGGAGCCCTTACCGGAATACGTGCGGCTGGTGACTGAGTTTTCA
AAGAAAACAGGAGACTACCCCAGCCTCTCTGCCACGGACATCCAAGTGCTTGCACTCACATACCAGTTGG
AAGCAGAGTTTGTTGGGGTGTCTCACCTAAAACAAGAACCACAGAAGGTTAAGGTGAGCTCATCGATTCA
GCACCCAGAAACACCTCTGCACATTTCTGGTTTCCATCTGCCCTACAAGCCTAAACCCCCACAAGAAACA
GAAAAAGGACACTCAGCTTGTGAGCCTGAGAACCTGGAATTTAGTTCCTTCATGTTCTGGAGAAACCCTT
TGCCCAACATCGATCATGAACTGCAGGAGCTGCTGATTGACAGAGGTGAGGACGTTCCAAGTGAGGAGGA
GGAGGAGGAAGAAAACGGGTTTGAAGACAGAAAAGATGACAGCGATGACGACGGGGGTGGCTGGATAACC
CCCAGTAACATCAAGCAGATCCAGCAGGAGCTGGAGCAGTGTGACGTCCCCGAGGACGTGCGGGTTGGCT
GCCTGACCACAGACTTCGCCATGCAGAATGTTCTGCTGCAGATGGGGCTGCACGTGCTGGCGGTGAACGG
CATGCTGATTCGTGAGGCCCGGAGCTACATCTTGCGCTGCCATGGCTGTTTCAAGACAACGTCTGACATG
AGCCGAGTGTTCTGCTCACACTGTGGGAACAAGACCCTGAAGAAAGTGTCCGTGACCGTCAGCGACGACG
GCACCCTGCACATGCACTTCTCCCGCAACCCCAAGGTGCTGAACCCCCGCGGCCTCCGGTACTCGCTTCC
CACTCCCAAAGGGGGCAAATACGCCATCAACCCCCATCTCACCGAGGATCAGCGCTTCCCTCAGCTGCGA
CTCTCCCAAAAGGCCAGGCAGAAAACCAACGTGTTCGCCCCTGACTACATCGCCGGGGTGTCACCCTTTG
TCGAGAATGACATCTCCAGCCGCTCAGCTACCCTGCAGGTCCGGGACAGCACCTTGGGAGCTGGGCGGAG
ACGCTTAAATCCCAACGCTTCCAGAAAGAAGTTTGTGAAGAAAAGGTGA

Translation (412 aa):
MAPVEHVVADAGAFLRHAALQDIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLVTEFS
KKTGDYPSLSATDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPETPLHISGFHLPYKPKPPQET
EKGHSACEPENLEFSSFMFWRNPLPNIDHELQELLIDRGEDVPSEEEEEEENGFEDRKDDSDDDGGGWIT
PSNIKQIQQELEQCDVPEDVRVGCLTTDFAMQNVLLQMGLHVLAVNGMLIREARSYILRCHGCFKTTSDM
SRVFCSHCGNKTLKKVSVTVSDDGTLHMHFSRNPKVLNPRGLRYSLPTPKGGKYAINPHLTEDQRFPQLR
LSQKARQKTNVFAPDYIAGVSPFVENDISSRSATLQVRDSTLGAGRRRLNPNASRKKFVKKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH