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Report for CCDS10034.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10034.1 Public Homo sapiens 15 KATNBL1 24 110 108 CCDS HistoryNCBI Gene:79768Re-query CCDS DB by CCDS ID:10034.1Re-query CCDS DB by GeneID:79768See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10034.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256544.8 ENSP00000256544.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256544.8Link to Ensembl Protein Viewer:ENSP00000256544.3Re-query CCDS DB by Nucleotide ID:ENST00000256544Re-query CCDS DB by Protein ID:ENSP00000256544
Original member Current member NCBI NM_024713.3 NP_078989.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024713.3Link to Protein Sequence:NP_078989.1Re-query CCDS DB by Nucleotide ID:NM_024713Re-query CCDS DB by Protein ID:NP_078989Link to BLAST:NP_078989.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078989.1 304 Q9H079 304 100% 0 0

Chromosomal Locations for CCDS 10034.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 34142339 34142371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34145398 34145491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34146761 34146850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34147200 34147289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34147380 34147430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34148632 34148750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34152790 34153069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34154644 34154684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 34163560 34163676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGGCATCAGAAACCCACAATGTTAAAAAACGGAACTTTTGTAATAAGATTGAGGATCATTTCATTGATC
TTCCTAGAAAAAAGATCTCTAATTTCACTAATAAGAACATGAAGGAGGTTAAGAAATCTCCAAAACAGTT
GGCTGCTTACATAAATAGAACAGTTGGACAAACTGTGAAAAGCCCAGATAAACTTCGTAAAGTGATCTAT
CGCAGAAAGAAAGTTCATCATCCCTTTCCAAATCCTTGTTACAGAAAAAAACAGTCCCCTGGAAGTGGGG
GCTGTGACATGGCAAATAAAGAAAATGAACTGGCTTGTGCAGGCCACCTGCCTGAAAAATTACACCATGA
TAGTCGAACATATTTGGTTAACTCCAGTGATTCTGGTTCTTCACAGACAGAAAGCCCATCATCAAAATAT
AGTGGGTTTTTTTCTGAGGTTTCTCAGGACCATGAAACAATGGCCCAAGTTTTGTTCAGCAGGAATATGA
GATTGAATGTAGCTTTAACTTTCTGGAGAAAGAGAAGTATAAGTGAACTTGTAGCTTATTTGTTGAGGAT
AGAAGATCTTGGCGTTGTGGTAGATTGCCTTCCTGTGCTCACCAATTGTTTACAGGAAGAAAAACAATAT
ATCTCACTTGGCTGCTGTGTTGACTTGTTGCCTCTAGTAAAGTCACTACTTAAAAGCAAATTTGAAGAAT
ATGTTATAGTTGGTTTAAACTGGCTTCAAGCAGTCATTAAAAGGTGGTGGTCAGAACTATCATCCAAAAC
AGAAATTATAAATGATGGAAATATTCAAATTTTAAAACAACAATTAAGTGGATTATGGGAACAGGAAAAC
CATCTTACTTTGGTTCCAGGATATACTGGTAATATAGCTAAGGATGTAGATGCTTATTTATTACAGTTAC
ATTGA

Translation (304 aa):
MASETHNVKKRNFCNKIEDHFIDLPRKKISNFTNKNMKEVKKSPKQLAAYINRTVGQTVKSPDKLRKVIY
RRKKVHHPFPNPCYRKKQSPGSGGCDMANKENELACAGHLPEKLHHDSRTYLVNSSDSGSSQTESPSSKY
SGFFSEVSQDHETMAQVLFSRNMRLNVALTFWRKRSISELVAYLLRIEDLGVVVDCLPVLTNCLQEEKQY
ISLGCCVDLLPLVKSLLKSKFEEYVIVGLNWLQAVIKRWWSELSSKTEIINDGNIQILKQQLSGLWEQEN
HLTLVPGYTGNIAKDVDAYLLQLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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