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Report for CCDS34453.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34453.1 Public Homo sapiens 6 RRP36 24 110 108 CCDS HistoryNCBI Gene:88745Re-query CCDS DB by CCDS ID:34453.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34453.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000244496.6 ENSP00000244496.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000244496.6Link to Ensembl Protein Viewer:ENSP00000244496.5Re-query CCDS DB by Nucleotide ID:ENST00000244496Re-query CCDS DB by Protein ID:ENSP00000244496
Original member Current member NCBI NM_033112.4 NP_149103.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033112.4Link to Protein Sequence:NP_149103.1Re-query CCDS DB by Nucleotide ID:NM_033112Re-query CCDS DB by Protein ID:NP_149103Link to BLAST:NP_149103.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149103.1 259 Q96EU6-1 259 100% 0 0

Chromosomal Locations for CCDS 34453.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43021655 43021784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43024985 43025132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43025263 43025329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43026037 43026141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43027178 43027252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43027360 43027477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43029092 43029228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGCCGGGAGCTAACTACCGCGCCGGGGCCGGGGCCGGGGCCGGGGCCCGACGTCCCCGCGGGGCCCGGG
ACCGCGAGGAGGACGGCGGGGGCCTGGAGCCCGCGGCCGTGGCCCGCGACCTATTGAGGGGCACATCTAA
CATGTCATTTGAGGAGCTGTTGGAATTGCAGAGCCAAGTGGGGACTAAGACGTACAAACAATTGGTAGCT
GGAAATAGTCCTAAGAAACAAGCTTCTAGACCACCTATCCAAAATGCATGTGTTGCAGATAAGCACAGGC
CTCTGGAAATGTCAGCCAAGATCCGAGTACCATTTTTACGTCAGGTTGTTCCCATTAGTAAAAAGGTAGC
CCGGGACCCTCGCTTTGATGATCTGTCAGGGGAATATAATCCTGAGGTGTTTGACAAAACATACCAATTC
TTGAATGACATCCGAGCGAAAGAGAAAGAGCTTGTGAAAAAACAGTTGAAGAAGCACCTTTCAGGAGAGG
AGCATGAGAAACTGCAGCAACTGCTTCAGCGAATGGAGCAGCAAGAAATGGCACAGCAGGAACGAAAGCA
ACAGCAGGAGCTGCACCTGGCCCTGAAGCAAGAACGTCGGGCTCAGGCCCAGCAGGGCCATCGGCCATAC
TTCCTGAAAAAATCTGAGCAGCGCCAGTTGGCACTAGCTGAGAAGTTCAAGGAGCTGAAACGCAGCAAGA
AATTGGAGAACTTCTTGAGTCGAAAGAGGCGACGAAATGCAGGCAAGGACAGGAGACATCTCCCTTTGAG
CAAAGAGTAA

Translation (259 aa):
MPGANYRAGAGAGAGARRPRGARDREEDGGGLEPAAVARDLLRGTSNMSFEELLELQSQVGTKTYKQLVA
GNSPKKQASRPPIQNACVADKHRPLEMSAKIRVPFLRQVVPISKKVARDPRFDDLSGEYNPEVFDKTYQF
LNDIRAKEKELVKKQLKKHLSGEEHEKLQQLLQRMEQQEMAQQERKQQQELHLALKQERRAQAQQGHRPY
FLKKSEQRQLALAEKFKELKRSKKLENFLSRKRRRNAGKDRRHLPLSKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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