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Report for CCDS7907.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7907.1 Public Homo sapiens 11 ACCS 24 110 108 CCDS HistoryNCBI Gene:84680Re-query CCDS DB by CCDS ID:7907.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7907.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263776.9 ENSP00000263776.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263776.9Link to Ensembl Protein Viewer:ENSP00000263776.8Re-query CCDS DB by Nucleotide ID:ENST00000263776Re-query CCDS DB by Protein ID:ENSP00000263776
Original member Current member NCBI NM_001127219.2 NP_001120691.1 Accepted alive Link to Nucleotide Sequence:NM_001127219.2Link to Protein Sequence:NP_001120691.1Re-query CCDS DB by Nucleotide ID:NM_001127219Re-query CCDS DB by Protein ID:NP_001120691Link to BLAST:NP_001120691.1
Original member Current member NCBI NM_032592.4 NP_115981.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032592.4Link to Protein Sequence:NP_115981.1Re-query CCDS DB by Nucleotide ID:NM_032592Re-query CCDS DB by Protein ID:NP_115981Link to BLAST:NP_115981.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001120691.1 501 Q96QU6-1 501 100% 0 0
NP_115981.1 501 Q96QU6-1 501 100% 0 0

Chromosomal Locations for CCDS 7907.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 44067628 44067915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44071256 44071315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44073447 44073517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44074612 44074681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44075526 44075592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44077279 44077376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44077845 44077922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44078684 44078784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44079531 44079620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44081020 44081065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44081179 44081320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44083169 44083311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44083424 44083577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 44083695 44083792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1506 nt):
ATGTTCACCCTTCCTCAAAAGGACTTCAGGGCTCCCACCACCTGTCTGGGCCCCACCTGCATGCAGGACC
TGGGCAGTAGCCATGGGGAAGATCTGGAAGGAGAATGCTCCAGAAAACTGGACCAGAAGCTGCCAGAGCT
CCGTGGAGTGGGTGATCCTGCCATGATCTCCTCTGATACCTCCTACCTGTCCTCTAGAGGAAGAATGATT
AAATGGTTCTGGGATTCAGCTGAGGAGGGCTACAGGACCTACCACATGGATGAGTATGATGAGGACAAGA
ACCCCAGTGGCATCATTAACTTGGGCACCAGTGAGAACAAACTCTGCTTTGACCTGCTGTCCTGGCGGCT
GAGTCAGCGCGACATGCAGAGGGTGGAGCCATCCCTGCTGCAGTATGCTGACTGGAGGGGACATCTGTTC
CTCCGGGAGGAAGTGGCCAAGTTCCTGTCTTTCTACTGCAAGAGCCCAGTACCCCTCAGACCAGAGAATG
TGGTTGTCCTGAATGGTGGTGCCTCGCTCTTCTCTGCTCTGGCCACGGTGCTGTGTGAGGCCGGGGAGGC
TTTCCTGATCCCCACCCCTTACTATGGCGCTATCACACAGCACGTGTGTCTCTATGGCAACATCCGGCTG
GCCTATGTCTACCTGGACAGTGAGGTCACTGGGCTAGACACACGCCCCTTCCAGCTCACAGTGGAGAAGC
TGGAGATGGCCCTGAGAGAAGCTCACTCTGAGGGTGTGAAGGTCAAAGGCCTCATCCTCATCAGCCCCCA
GAACCCTCTGGGTGATGTATACTCCCCTGAAGAGCTACAGGAGTACCTGGTATTTGCCAAGAGGCACAGG
CTGCATGTGATTGTGGATGAGGTCTACATGCTGTCCGTGTTTGAGAAGTCTGTTGGGTACCGCAGTGTCC
TAAGCCTGGAAAGGCTCCCTGACCCCCAGAGGACCCATGTGATGTGGGCAACCAGCAAGGACTTCGGGAT
GTCTGGGCTCCGCTTTGGCACGCTGTACACAGAAAACCAGGATGTGGCCACTGCCGTGGCTTCCCTCTGC
CGCTACCACGGCCTCAGTGGCTTGGTCCAGTACCAGATGGCACAGCTGCTCCGGGACCGTGACTGGATCA
ACCAGGTGTACCTGCCGGAAAACCATGCCCGGCTCAAGGCTGCCCACACCTATGTCTCAGAAGAGCTTAG
GGCATTGGGGATCCCCTTCTTGAGTCGTGGGGCTGGCTTCTTCATCTGGGTTGACTTGAGAAAGTACCTG
CCCAAGGGCACCTTTGAGGAGGAAATGCTGCTCTGGCGCCGCTTTTTGGACAACAAGGTGCTGCTGTCCT
TTGGCAAGGCCTTCGAGTGTAAAGAGCCTGGTTGGTTTCGCTTTGTCTTCTCAGACCAGGTCCACCGGCT
TTGCCTGGGGATGCAGAGGGTCCAGCAGGTGCTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCC
TCTCAGAGCCAGGAGCCAAGTGACCAACGCAGGTGA

Translation (501 aa):
MFTLPQKDFRAPTTCLGPTCMQDLGSSHGEDLEGECSRKLDQKLPELRGVGDPAMISSDTSYLSSRGRMI
KWFWDSAEEGYRTYHMDEYDEDKNPSGIINLGTSENKLCFDLLSWRLSQRDMQRVEPSLLQYADWRGHLF
LREEVAKFLSFYCKSPVPLRPENVVVLNGGASLFSALATVLCEAGEAFLIPTPYYGAITQHVCLYGNIRL
AYVYLDSEVTGLDTRPFQLTVEKLEMALREAHSEGVKVKGLILISPQNPLGDVYSPEELQEYLVFAKRHR
LHVIVDEVYMLSVFEKSVGYRSVLSLERLPDPQRTHVMWATSKDFGMSGLRFGTLYTENQDVATAVASLC
RYHGLSGLVQYQMAQLLRDRDWINQVYLPENHARLKAAHTYVSEELRALGIPFLSRGAGFFIWVDLRKYL
PKGTFEEEMLLWRRFLDNKVLLSFGKAFECKEPGWFRFVFSDQVHRLCLGMQRVQQVLAGKSQVAEDPRP
SQSQEPSDQRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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