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Report for CCDS25508.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25508.1 Public Mus musculus 11 Kif18b 23 108 98 CCDS HistoryNCBI Gene:70218Re-query CCDS DB by CCDS ID:25508.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25508.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021311.9 ENSMUSP00000021311.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021311.9Link to Ensembl Protein Viewer:ENSMUSP00000021311.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000021311Re-query CCDS DB by Protein ID:ENSMUSP00000021311
Original member Current member NCBI NM_197959.2 NP_932063.2 Accepted alive Link to Nucleotide Sequence:NM_197959.2Link to Protein Sequence:NP_932063.2Re-query CCDS DB by Nucleotide ID:NM_197959Re-query CCDS DB by Protein ID:NP_932063Link to BLAST:NP_932063.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932063.2 834 Q6PFD6 834 100% 0 0

Chromosomal Locations for CCDS 25508.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 102906200 102906276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102906496 102906581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102906996 102907076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102908113 102908638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102908887 102909092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102912354 102912469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102912920 102913088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102913450 102913550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102913684 102913758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102914250 102914426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102914539 102914736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102914815 102914925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102915150 102915254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102915543 102915700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 102916189 102916507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2505 nt):
ATGGTGATGGCTGTGGAAGACAGCGTGGTTCGGGTGGTCGTGCGGGTGAGGCCTCCCACCCCTAAGGAGC
TAGAGAGTCAGCGGCGGCCTGTGATTCAGGTGGTAGACGAGCGGATGCTGGTATTTGACCCCGAGGAGTG
TGATGGGGGATTTCCTGGCCTAAAATGGAGTGGTTCCCACAATGGCCCCAAGAAGAAGGGCAAAGACCTG
ACATTTGTCTTTGACCGTGTCTTTGGTGAGATGGCCACTCAGGAGGATGTGTTCCAGCACACCACACACA
ACATCCTCGACAGCTTTCTCCAGGGCTACAACTGCTCAGTGTTTGCCTATGGCGCCACCGGGGCTGGGAA
GACACACACTATGCTGGGGAGGGAGGGAGAGCCCGGCATCATGTACCTGACCACCATGGAACTGTACAGG
CGTCTGGAAGCCCGCCAGGAAGAAAAGCAATTCGAGGTGCTCATCAGTTACCTGGAGGTGTACAATGAGC
AGATCCATGACCTCCTGGAGCCCAAAGGACCCCTCACCATCCGTGAGGACCCAGATAAGGGTGTTGTGGT
GCCGGGACTTTCTTTCCACCAGCCAGCCTCAGCCGAGCAGTTACTTGAGATGCTGACAAGAGGCAACTGT
AGCCGCACACAGCACCCCACGGATGCCAACGCCACATCCTCCCGCTCTCATGCCATTTTCCAGATCTTTG
TGAAGCAGCAGGACCGGGTTCCAGGACTGACCCAGGCCCTTCGAGTAGCCAAGATGAGCTTGATTGACCT
GGCTGGCTCCGAGCGGGCATCCAGCACCCATGCCAAAGGAGAGCGGCTGCGGGAGGGTGCCAACATCAAC
CGCTCTCTGTTAGCACTCATTAATGTCCTCAATGCCCTGGCTGATGCAAAGGGCCGCAAGTCTCACGTAC
CCTACCGAGACAGCAAGCTGACCCGCCTGCTCAAGGACTCCATCGGGGGCAACTGCCGCACAGTGATGAT
TGCTGCCATCAGCCCTTCCAGCCTGACCTACGAGGATACTTACAACACCCTCAAATATGCTGACCGTGCC
AAGGAGATCAGACTCACGCTGAAGAGCAATGTGATCAGCGTGGACCATCACATTAGCCAATATGCCACCA
TCTGCCAGCAGCTCCAGGCTGAGGTAGCCTTCCTGAGGGAGAAACTCCAGATGTATGAGGCTGGAGCCCA
GGCCCTGCAACAGCAGTGCTCTCCACAGCCTCCCACGTTGAGCATTCCACAAAGCCTTTCTAGCTCCTCG
TTACAGCCTGGGCCCTCCAGCCAGTCCTCTACCCTAGAGTGCCATGCAAAGAATGAAACTCTTCAAGAGG
AGAGCCTGGGATCAGACGCCCAGGGACAGGAGATTGTGGAAGAAAGTGCTTCAGAGCAGGAGCAGTGTCC
CCAGGACAAACAGTGTCCAACCCAGAAGCCAGAGCCGAACCTGCCCGGGTCCCCTAGTCCAAGTGTACAG
GCAAAGCCAGGCACGGGCCAACACTCACCACAGAAACAGGATGCGGACCACTCCAAACAGTTGGCCCTCC
AGGTGCTCCGCCTGGCCCAGCGACAATACTCCCTGCTGCAGGCAGCCAACCTCCTGACTCCTGACATGAT
CTCAGAGTTTGAGACCCTGCAGCAACTAGTGCTCGAGGAAAGCGTTGACCACAGGGCTGAGAGCCCCAGG
TCTCCTGCTCTGGCCAGAGGGGACCCACTAGCTCAGGCGCTGTGTTCCGAGTCTAAGTCTTCAGGGTACT
GTGGTCCAGTGACCAGGACCATGGCAAAGCAACTGAATGGTCTCACACACACTCTGGGGGCCCCACTCGC
ACCTGACTGCACCTCAGATAAGACATTCCAAAAGCCTACCAAGGAGAAGAAAAGGAAGCTGACCCCCGAA
GAGCCAGGCAGCCTACCAGCCCCGAATCTGGAGATGAAGCGCCAGCGCCAGTCCTTCCTCCCCTGCCTAA
GAAGGGGCTCTCTACCTAAGGCCCAGCCGTGCTCTGAGCCGAGAACTCCCAAAAGAGAGAGGGCCTCTTC
CCCCTCTCCCTCCTCCCGAGTCTGCCCAGCCACGGTCATTAAAAGCCGGGTACCCCTGGGCCCTTCTGCC
TTACAGAACTGTTCCACTCCTCTGGCCCTACCCACTCGGGACCTCAACACCACCTTCAATGTCTCTGAGG
AGTCCCCCTCCAAACCCAGCTTCCAGGAATTTGTTGACTGGGAAAAAGTTTCCCCGGAGCTGAACAGTAC
CGACCAGCCCTTTCTCCCCAGCGCACCTGTCTTCATATTCACGAAGGGCCGCAAGCCTTCGCTTCCTGCA
GTCACTGCCAGCAAGAAGAGGCGTACTATGAGGCCCTCAGTCTCCCGAGGCCGCAGCTGTATTGCCCGTC
TCCACAGTAGCACCTTGAAGAAGCCAAACAGACCCTTCACTGTCCCAGAGCCACCCTTGAGCCCCCACTG
CCTTGATGACCAGAGGACTCCTAAAGGACTGACTGGGGTGACAGAGTCCTATTAA

Translation (834 aa):
MVMAVEDSVVRVVVRVRPPTPKELESQRRPVIQVVDERMLVFDPEECDGGFPGLKWSGSHNGPKKKGKDL
TFVFDRVFGEMATQEDVFQHTTHNILDSFLQGYNCSVFAYGATGAGKTHTMLGREGEPGIMYLTTMELYR
RLEARQEEKQFEVLISYLEVYNEQIHDLLEPKGPLTIREDPDKGVVVPGLSFHQPASAEQLLEMLTRGNC
SRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQALRVAKMSLIDLAGSERASSTHAKGERLREGANIN
RSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDSIGGNCRTVMIAAISPSSLTYEDTYNTLKYADRA
KEIRLTLKSNVISVDHHISQYATICQQLQAEVAFLREKLQMYEAGAQALQQQCSPQPPTLSIPQSLSSSS
LQPGPSSQSSTLECHAKNETLQEESLGSDAQGQEIVEESASEQEQCPQDKQCPTQKPEPNLPGSPSPSVQ
AKPGTGQHSPQKQDADHSKQLALQVLRLAQRQYSLLQAANLLTPDMISEFETLQQLVLEESVDHRAESPR
SPALARGDPLAQALCSESKSSGYCGPVTRTMAKQLNGLTHTLGAPLAPDCTSDKTFQKPTKEKKRKLTPE
EPGSLPAPNLEMKRQRQSFLPCLRRGSLPKAQPCSEPRTPKRERASSPSPSSRVCPATVIKSRVPLGPSA
LQNCSTPLALPTRDLNTTFNVSEESPSKPSFQEFVDWEKVSPELNSTDQPFLPSAPVFIFTKGRKPSLPA
VTASKKRRTMRPSVSRGRSCIARLHSSTLKKPNRPFTVPEPPLSPHCLDDQRTPKGLTGVTESY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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