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Report for CCDS27283.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27283.1 Public Mus musculus 14 Gpalpp1 23 108 98 CCDS HistoryNCBI Gene:67467Re-query CCDS DB by CCDS ID:27283.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27283.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022585.4 ENSMUSP00000022585.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022585.4Link to Ensembl Protein Viewer:ENSMUSP00000022585.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000022585Re-query CCDS DB by Protein ID:ENSMUSP00000022585
Original member Current member NCBI NM_026177.3 NP_080453.2 Accepted alive Link to Nucleotide Sequence:NM_026177.3Link to Protein Sequence:NP_080453.2Re-query CCDS DB by Nucleotide ID:NM_026177Re-query CCDS DB by Protein ID:NP_080453Link to BLAST:NP_080453.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080453.2 346 Q69ZC8 346 100% 0 0

Chromosomal Locations for CCDS 27283.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 76090528 76090746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76095007 76095105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76098454 76098618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76099060 76099191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76102446 76102551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76106054 76106152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76107321 76107453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 76110617 76110704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1041 nt):
ATGGCTAGGGACCTGATCGGGCCGGCACTGCCGCCAGGCTTCAAGGAGCACGCGACAGTTGAGGACGAGG
AACGGGACCCGAGCCCGGTTGCAGGGCCAGCTCTGCCCCCTAATTACAGAAGCTGCAGTTCAGACTCCTC
AGACAGTGACGAGGACAGTAGTTCTTTATCTGAAGAAGGCAATCAAGAGTCTGAAGAAGAGGACACTGGT
CCAAATGCAAAAAAGCAGAGGCGAAATCAAGATGATGATGACGATGATGATGGGTTTTTTGGACCAGCCC
TTCCTCCTGGGTTTAAGAAGCAGGATGACTCTCCTCCCAGGCCTATAATAGGTCCCGCATTGCCACCTGG
TTTCATTAAGTCTCCACAGAAAAATGACAAAGGCAGAGAGGATCCAGGGCAAGTGTCATCATTCTTCAAC
TCAGAGGAAGCAGAGAGCGGTGAAGATGAGGATATTGTTGGACCAATGCCTGCAAAAGGACCAGTTAACT
ATAGCGTCACGACAGAGTTTGAAAAAAGGGCCCAGAGGATGAAGGAAAAATTGACCAAAGGAGATGATGA
TTCATCTAAACCAATTACAAGAGAGTCCTGGATGACTGAGCTTCCACCAGAAATGAAAGAATTTGGTCTG
GGGCCAAGAACCTTTAAGAGAAGAGCAGATGACAAATCCGGAGACCGATCCGTCTGGACAGACACCCCAG
CTGACCGGGAGAGGAAAGCTAAGGAAATACAAGAAGCAAGGAAGTCATTCAGTAAGAAAGATGAAGAAAA
CATATTGTCAGGAAGGGATAAGAGACTGGCCGAGCAAGTATCCTCATACAATGAATCAAAAAGATCAGAA
TCCCTCATGGACATTCATCATAAGAAGTTAAAGAGTAAGGCTGCTGAAGATAAAAACAAGCACCAGGAGA
GAATACCATTTGACCGTGATAAAGATCTCAAGGTTAATCGGTTTGATGAGGCTCAGAAAAAAGCCCTAAT
AAAGAAATCCAGAGAACTAAACACCCGGTTTTCACATGGCAAAGGCAACATGTTTTTATAA

Translation (346 aa):
MARDLIGPALPPGFKEHATVEDEERDPSPVAGPALPPNYRSCSSDSSDSDEDSSSLSEEGNQESEEEDTG
PNAKKQRRNQDDDDDDDGFFGPALPPGFKKQDDSPPRPIIGPALPPGFIKSPQKNDKGREDPGQVSSFFN
SEEAESGEDEDIVGPMPAKGPVNYSVTTEFEKRAQRMKEKLTKGDDDSSKPITRESWMTELPPEMKEFGL
GPRTFKRRADDKSGDRSVWTDTPADRERKAKEIQEARKSFSKKDEENILSGRDKRLAEQVSSYNESKRSE
SLMDIHHKKLKSKAAEDKNKHQERIPFDRDKDLKVNRFDEAQKKALIKKSRELNTRFSHGKGNMFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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