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Report for CCDS11326.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11326.1 Public Homo sapiens 17 MRPL45 24 110 108 CCDS HistoryNCBI Gene:84311Re-query CCDS DB by CCDS ID:11326.1Re-query CCDS DB by GeneID:84311See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11326.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000613675.5 ENSP00000484903.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000613675.5Link to Ensembl Protein Viewer:ENSP00000484903.1Re-query CCDS DB by Nucleotide ID:ENST00000613675Re-query CCDS DB by Protein ID:ENSP00000484903
Original member Current member NCBI NM_032351.6 NP_115727.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032351.6Link to Protein Sequence:NP_115727.5Re-query CCDS DB by Nucleotide ID:NM_032351Re-query CCDS DB by Protein ID:NP_115727Link to BLAST:NP_115727.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115727.5 306 Q9BRJ2 306 99.6732% 0 1

Chromosomal Locations for CCDS 11326.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 38297184 38297249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38298449 38298626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38299351 38299468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38306533 38306631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38318687 38318735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38320618 38320767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38322126 38322299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 38322509 38322595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (921 nt):
ATGGCAGCCCCCATACCTCAAGGGTTCTCTTGTTTATCGAGGTTTTTGGGCTGGTGGTCTCGGCAGCCAG
TTCTGGTGACTCAGTCCGCAGCTATAGTTCCAGTAAGAACTAAAAAACGTTTCACACCTCCTATTTATCA
ACCTAAATTTAAAACAGAAAAGGAGTTTATGCAACATGCCCGGAAAGCAGGATTGGTTATTCCTCCAGAA
AAATCGGACCGTTCCATACATCTGGCCTGTACAGCTGGTATATTTGATGCCTATGTTCCTCCTGAGGGTG
ATGCACGCATATCATCTCTTTCAAAGGAGGGACTGATAGAGAGAACTGAACGAATGAAGAAGACTATGGC
ATCACAAGTGTCAATCCGGAGGATAAAAGACTATGATGCCAACTTTAAAATAAAGGACTTCCCTGAAAAA
GCTAAGGATATCTTTATTGAAGCTCACCTTTGTCTAAATAACTCAGACCATGACCGGCTTCATACCTTGG
TAACTGAACACTGTTTTCCAGACATGACTTGGGACATCAAATATAAGACCGTCCGCTGGAGCTTTGTGGA
ATCTTTAGAGCCCTCTCATGTTGTTCAAGTTCGCTGTTCAAGTATGATGAACCAGGGCAACGTGTACGGC
CAGATCACCGTACGCATGCACACCCGGCAGACTCTGGCCATCTATGACCGGTTTGGCCGGTTGATGTATG
GACAGGAAGATGTACCCAAGGATGTCCTGGAGTATGTTGTATTCGAAAAGCAGTTGACAAACCCCTATGG
AAGCTGGAGAATGCATACCAAGATCGTTCCCCCATGGGCACCCCCTAAGCAGCCCATCCTTAAGACGGTG
ATGATCCCTGGCCCTCAGCTGAAACCAGAAGAAGAATATGAAGAGGCACAAGGAGAGGCCCAGAAGCCTC
AGCTAGCCTGA

Translation (306 aa):
MAAPIPQGFSCLSRFLGWWSRQPVLVTQSAAIVPVRTKKRFTPPIYQPKFKTEKEFMQHARKAGLVIPPE
KSDRSIHLACTAGIFDAYVPPEGDARISSLSKEGLIERTERMKKTMASQVSIRRIKDYDANFKIKDFPEK
AKDIFIEAHLCLNNSDHDRLHTLVTEHCFPDMTWDIKYKTVRWSFVESLEPSHVVQVRCSSMMNQGNVYG
QITVRMHTRQTLAIYDRFGRLMYGQEDVPKDVLEYVVFEKQLTNPYGSWRMHTKIVPPWAPPKQPILKTV
MIPGPQLKPEEEYEEAQGEAQKPQLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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