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Report for CCDS22223.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22223.1 Public Mus musculus 8 Fut10 23 108 98 CCDS HistoryNCBI Gene:171167Re-query CCDS DB by CCDS ID:22223.1Re-query CCDS DB by GeneID:171167See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22223.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066173.11 ENSMUSP00000069816.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066173.11Link to Ensembl Protein Viewer:ENSMUSP00000069816.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000066173Re-query CCDS DB by Protein ID:ENSMUSP00000069816
Original member Current member EBI ENSMUST00000161502.1 ENSMUSP00000125265.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161502.1Link to Ensembl Protein Viewer:ENSMUSP00000125265.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161502Re-query CCDS DB by Protein ID:ENSMUSP00000125265
Original member NCBI NM_001012517.5 NP_001012535.1 Updated not alive Link to Nucleotide Sequence:NM_001012517.5Link to Protein Sequence:NP_001012535.1Re-query CCDS DB by Nucleotide ID:NM_001012517Re-query CCDS DB by Protein ID:NP_001012535
Current member NCBI NM_001012517.6 NP_001012535.1 Accepted alive Link to Nucleotide Sequence:NM_001012517.6Link to Protein Sequence:NP_001012535.1Re-query CCDS DB by Nucleotide ID:NM_001012517Re-query CCDS DB by Protein ID:NP_001012535Link to BLAST:NP_001012535.1
Original member NCBI NM_001286422.1 NP_001273351.1 Updated not alive Link to Nucleotide Sequence:NM_001286422.1Link to Protein Sequence:NP_001273351.1Re-query CCDS DB by Nucleotide ID:NM_001286422Re-query CCDS DB by Protein ID:NP_001273351
Current member NCBI NM_001286422.2 NP_001273351.1 Accepted alive Link to Nucleotide Sequence:NM_001286422.2Link to Protein Sequence:NP_001273351.1Re-query CCDS DB by Nucleotide ID:NM_001286422Re-query CCDS DB by Protein ID:NP_001273351Link to BLAST:NP_001273351.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001012535.1 481 Q5F2L2-1 481 100% 0 0
NP_001273351.1 481 Q5F2L2-1 481 100% 0 0

Chromosomal Locations for CCDS 22223.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 31195209 31195289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31201210 31201504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31235595 31236430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 31259900 31260133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1446 nt):
ATGGTGCGGTTTCAGAGGAGGAAGCTTCTGGCCTCTTGCCTGTGTGTGACAGCGACTGTCTTTCTGATGG
TCACACTCCAGGTAGTGGTTGAGCTTGGGAAATTTGAAAGGAAGAAGCTTAAAGACTCCAATGTGCAAGA
CGGACATAGAGATGTGGAGGGAGAGCCTAAACACCTGGAGCCGTTTCCTGAAAAGGAAGCACTGGCCTTG
GCTGGGAGGACAAAGGTGGATGCTGGTAGCTACCCCATCGTGCTGTGGTGGTCCCCACTGACTGGAGAGA
CTGGCAGGCTTGGCCAGTGTGGGGCAGATGCTTGCTTCTTTACCATCAACAGGACCTTCCAGCATCATCC
GATGACCAGGGCCTTCCTATTCTACGGTACTGACTTTAACATAGACAGCTTACCTTTGCCTCGGGAAGCC
CATCATGACTGGGCGCTTTTCCATGAAGAGTCCCCCAAAAACAATTATAAGCTCTTCCATAAACCAGTCA
TCACCTTATTCAACCATACGGCCACATTCAGCAGGCATTCCCACTTGCCACTGACTACGCAGTACCTGGA
AGGCGTGGACGTCCTGAAGTCACTCAGATACCTAGTTCCTTTACAGGCTAAGAACAACCTAAGACAAAAA
CTGGCCCCATTGGTATATGTTCAGTCGGACTGCGATCCACCATCAGACAGGGACAGCTATGTCCGGGAGC
TGATGGCGTACATTGAAGTTGATTCCTATGGCGAGTGTTTACAGAACAGAGATCTTCCCCAGCAGCTGAA
AAACCCCGCCTCCATGGATGCTGATGCTTTCTACAGAGTCATTGCCCAGTATAAGTTCATCCTGGCCTTT
GAGAATGCGGTCTGTGACGATTACATCACAGAGAAGTTCTGGAGACCACTGAAACTGGGGGTCGTGCCCG
TGTATTACGGATCCCCCACCATCGCCGACTGGCTTCCAAGTAACCGAAGCGCCATTCTGGTGTCGGAATT
CTCTCACCCCAGAGAGCTGGCGAGCTTCATTAGGAGACTGGATTATGACGATGGGTTGTATGAGACCTAT
GTAGAGTGGAAGCTAAAGGGCAAGATCTCTAACCAGCGGCTTCTGACAGCTCTCAATGAACGGGAGTGGG
GTGTGCAGGACATTAACCAGGACAACTACATTGACTCGTTTGAGTGTATGGTGTGCCGCAGGGTGTGGGC
AAACAGTAGGCTGCAGGAGCAGGGCTTACCACCCAAACAATGGAAGGCAGATGTTAGCCACCTGCATTGC
CCGGAGCCTGCCTTGTTCACCTTCTCATCTCCAGCTTCTCCGGCCCTACGTGGGAGATCGTTGCGAGAGC
TGTGGCTACCTAGCTTCCAACAGTCTAAAAAAGAAGCCCAGGCACTGAGGTGGCTGGTGGATAGGAATCA
AAATTTTTCATCTGAAGAGTTCTGGGCTCTAGTATTTAAGGACTAA

Translation (481 aa):
MVRFQRRKLLASCLCVTATVFLMVTLQVVVELGKFERKKLKDSNVQDGHRDVEGEPKHLEPFPEKEALAL
AGRTKVDAGSYPIVLWWSPLTGETGRLGQCGADACFFTINRTFQHHPMTRAFLFYGTDFNIDSLPLPREA
HHDWALFHEESPKNNYKLFHKPVITLFNHTATFSRHSHLPLTTQYLEGVDVLKSLRYLVPLQAKNNLRQK
LAPLVYVQSDCDPPSDRDSYVRELMAYIEVDSYGECLQNRDLPQQLKNPASMDADAFYRVIAQYKFILAF
ENAVCDDYITEKFWRPLKLGVVPVYYGSPTIADWLPSNRSAILVSEFSHPRELASFIRRLDYDDGLYETY
VEWKLKGKISNQRLLTALNEREWGVQDINQDNYIDSFECMVCRRVWANSRLQEQGLPPKQWKADVSHLHC
PEPALFTFSSPASPALRGRSLRELWLPSFQQSKKEAQALRWLVDRNQNFSSEEFWALVFKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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