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Report for CCDS10333.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10333.2 Public Homo sapiens 15 ALPK3 24 110 108 CCDS HistoryNCBI Gene:57538Re-query CCDS DB by CCDS ID:10333.2See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10333.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258888.6 ENSP00000258888.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258888.6Link to Ensembl Protein Viewer:ENSP00000258888.6Re-query CCDS DB by Nucleotide ID:ENST00000258888Re-query CCDS DB by Protein ID:ENSP00000258888
Original member Current member NCBI NM_020778.5 NP_065829.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020778.5Link to Protein Sequence:NP_065829.4Re-query CCDS DB by Nucleotide ID:NM_020778Re-query CCDS DB by Protein ID:NP_065829Link to BLAST:NP_065829.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065829.4 1705 Q96L96 1705 100% 0 0

Chromosomal Locations for CCDS 10333.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 84817453 84817595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84823330 84823368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84827484 84827605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84838980 84839097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84839702 84840932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84856392 84858555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84859243 84859390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84859776 84859903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84860037 84860072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84862635 84862915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84863552 84863640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84864442 84864665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84867317 84867365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84868111 84868456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5118 nt):
ATGGGGTCGCGGAGGGCCCCCAGCCGGGGCTGGGGCGCGGGTGGGCGGTCGGGGGCGGGGGGCGACGGTG
AGGACGACGGCCCCGTGTGGATCCCCAGCCCAGCCAGCCGGAGCTACCTGCTCAGCGTGCGGCCCGAGAC
CAGCTTATCAAGCAACCGGTTGTCTCACCCCAGCTCTGGAAGGAGCACCTTCTGCTCCATCATTGCTCAG
CTCACAGAGGAGACCCAGCCGCTATTTGAGACCACGCTCAAGTCCCGGTCTGTGTCCGAGGACAGCGACG
TCAGGTTCACCTGCATCGTCACAGGATACCCAGAGCCAGAGGTGACCTGGTACAAGGATGATACGGAGCT
GGACCGCTACTGTGGCTTGCCAAAATATGAGATCACTCATCAGGGCAACCGCCACACACTGCAGCTGTAC
AGGTGTCGAGAAGAAGATGCCGCCATCTACCAGGCCTCTGCCCAGAACAGCAAGGGCATTGTGTCCTGCT
CAGGGGTCCTGGAGGTGGGCACCATGACTGAGTACAAGATCCACCAGCGCTGGTTCGCCAAGTTGAAGCG
CAAGGCTGCGGCAAAGCTGCGCGAGATCGAGCAGAGCTGGAAGCACGAGAAGGCGGTGCCTGGGGAGGTC
GACACTCTGCGCAAGCTCAGCCCCGACCGCTTCCAGCGAAAGCGGCGATTGAGCGGGGCTCAAGCGCCGG
GCCCCTCGGTCCCTACCAGGGAGCCTGAGGGTGGGACCCTGGCGGCTTGGCAGGAGGGAGAGACTGAGAC
TGCTCAGCACTCAGGTTTGGGCCTGATCAACAGTTTTGCTTCTGGAGAAGTGACCACCAACGGGGAGGCT
GCCCCCGAGAATGGAGAGGACGGAGAGCATGGCTTGCTGACATACATCTGTGACGCCATGGAGCTGGGGC
CTCAGAGAGCCCTCAAAGAGGAGAGTGGGGCCAAGAAGAAAAAGAAAGATGAGGAATCCAAGCAAGGCCT
GCGGAAGCCAGAGTTAGAGAAGGCAGCCCAAAGCCGCCGTTCTTCAGAAAACTGCATCCCCAGCTCAGAC
GAGCCTGACTCCTGTGGGACTCAGGGGCCCGTGGGCGTGGAGCAGGTTCAGACCCAGCCCAGAGGCAGGG
CTGCACGGGGGCCTGGGTCCTCTGGCACAGATAGTACCAGGAAGCCAGCCTCTGCTGTGGGCACTCCAGA
CAAGGCCCAGAAGGCCCCTGGCCCAGGCCCAGGCCAGGAAGTGTATTTCTCCTTGAAGGACATGTACCTG
GAGAACACCCAGGCAGTCAGGCCTCTTGGGGAAGAGGGACCCCAGACCCTGAGTGTCCGGGCGCCTGGGG
AGAGTCCCAAGGGGAAGGCACCCCTCAGGGCTAGAAGCGAGGGGGTGCCTGGCGCTCCTGGCCAGCCCAC
ACACTCCTTGACCCCCCAGCCGACTAGGCCTTTCAACAGAAAGAGATTTGCCCCTCCAAAGCCCAAAGGA
GAGGCCACCACTGACAGCAAGCCCATTTCTTCTCTGAGTCAAGCTCCAGAATGCGGGGCCCAGAGCTTAG
GAAAGGCCCCACCTCAGGCCTCTGTGCAGGTGCCGACGCCCCCTGCCCGGCGGAGACATGGCACCCGGGA
CAGCACGTTGCAGGGGCAAGCAGGCCACAGGACTCCAGGAGAGGTCCTGGAATGCCAGACAACCACGGCT
CCTACCATGTCGGCCAGCAGCAGCTCTGATGTAGCCTCCATTGGGGTTAGCACTTCCGGAAGTCAAGGTA
TCATTGAACCCATGGATATGGAAACCCAGGAGGATGGGAGAACATCTGCTAACCAGAGAACTGGAAGCAA
GAAGAATGTGCAGGCAGATGGGAAGATACAAGTGGATGGAAGGACCAGGGGAGATGGAACACAGACAGCC
CAGAGGACACGTGCAGATAGGAAGACGCAGGTGGATGCTGGGACACAAGAAAGCAAGAGGCCACAGTCAG
ACAGGAGTGCACAGAAGGGCATGATGACACAGGGAAGGGCAGAGACACAGCTAGAAACAACACAGGCAGG
TGAGAAGATACAGGAAGACAGGAAGGCCCAGGCAGATAAGGGCACACAGGAAGACAGAAGGATGCAGGGA
GAGAAGGGGATGCAGGGAGAGAAGGGGACGCAGTCAGAGGGGAGCGCGCCCACAGCCATGGAAGGTCAGT
CTGAGCAAGAGGTGGCAACCAGCCTCGGCCCACCATCCAGAACCCCCAAACTCCCACCTACAGCGGGTCC
TAGAGCTCCTCTGAATATTGAATGTTTTGTACAGACCCCAGAAGGGTCTTGTTTCCCAAAAAAACCTGGT
TGCCTGCCCAGATCTGAGGAGGCAGTAGTAACAGCCTCCAGGAACCATGAGCAAACTGTGCTGGGTCCCC
TGTCAGGGAACCTCATGCTCCCAGCACAGCCGCCCCATGAGGGGAGTGTGGAGCAGGTGGGAGGAGAGAG
ATGCCGAGGGCCACAGTCATCAGGCCCAGTCGAGGCCAAGCAGGAGGACAGCCCGTTCCAGTGCCCCAAG
GAGGAGCGGCCAGGGGGAGTGCCGTGTATGGATCAGGGTGGCTGTCCTCTAGCTGGCCTGAGCCAGGAGG
TACCCACGATGCCTTCTCTTCCTGGAACTGGGCTGACAGCTAGCCCAAAGGCGGGGCCGTGTAGCACCCC
GACTTCTCAGCACGGGAGCACAGCCACCTTCCTGCCCTCTGAGGATCAGGTCCTGATGAGTTCTGCCCCA
ACACTGCACCTGGGGCTGGGGACCCCCACTCAGAGTCACCCACCAGAAACCATGGCCACCAGCAGTGAGG
GGGCCTGCGCCCAGGTACCAGATGTGGAGGGGCGGACCCCAGGTCCCCGGAGCTGTGACCCTGGCCTCAT
AGATTCCCTGAAGAACTACCTGCTTCTGCTGCTGAAGCTGTCCAGCACAGAGACAAGTGGAGCAGGGGGA
GAGTCCCAGGTGGGGGCAGCCACCGGAGGTCTGGTGCCCTCAGCCACTCTGACACCCACTGTGGAAGTGG
CTGGGCTTAGTCCCCGGACATCGAGGCGCATCCTGGAGCGTGTGGAGAACAACCACCTGGTGCAGAGTGC
ACAGACCCTGCTGCTGAGCCCCTGTACCTCCCGCCGCCTCACCGGCCTCCTGGACCGTGAGGTGCAGGCT
GGCCGCCAGGCCCTTGCTGCTGCCCGAGGCTCCTGGGGTCCTGGTCCCAGCTCCCTCACTGTCCCTGCCA
TTGTGGTAGACGAGGAGGACCCTGGGCTGGCCTCAGAAGGAGCCAGTGAGGGTGAAGGAGAGGTTTCCCC
TGAGGGGCCTGGCCTCCTGGGGGCCTCTCAGGAGAGCAGCATGGCTGGTCGACTGGGGGAGGCGGGTGGG
CAGGCAGCCCCTGGACAGGGGCCCTCAGCAGAGAGCATAGCCCAGGAGCCCTCCCAAGAGGAGAAGTTCC
CAGGGGAGGCTCTGACAGGTCTCCCGGCAGCTACACCTGAGGAACTGGCTCTAGGGGCCCGGAGGAAGAG
ATTTCTCCCTAAGGTCAGAGCAGCAGGAGACGGGGAGGCAACCACACCTGAAGAAAGGGAGAGCCCCACG
GTTTCCCCCCGGGGGCCCAGGAAAAGCCTGGTGCCTGGGTCCCCAGGGACTCCAGGGCGGGAGAGACGCT
CCCCTACGCAGGGCAGAAAGGCGAGCATGCTGGAGGTGCCTCGGGCAGAGGAGGAGCTGGCGGCAGGAGA
CCTGGGCCCCAGCCCCAAGGCCGGCGGTCTGGACACAGAGGTGGCCCTGGATGAAGGCAAGCAGGAGACA
CTGGCCAAGCCCAGGAAAGCCAAAGACCTGCTGAAAGCCCCACAGGTGATCCGGAAGATTCGGGTGGAGC
AGTTTCCTGATGCCTCCGGTAGCCTGAAGCTGTGGTGCCAGTTTTTCAACATTCTTAGTGACTCAGTCTT
GACATGGGCCAAGGATCAGCGCCCAGTGGGCGAGGTGGGCAGGAGCGCAGGGGATGAGGGGCCGGCGGCC
TTGGCCATCGTGCAGGCCTCCCCCGTAGACTGCGGTGTGTATCGGTGCACCATCCACAATGAGCACGGCT
CGGCCTCCACCGACTTCTGCCTCAGCCCTGAGGTGTTGTCAGGATTCATCTCCAGAGAAGAAGGTGAAGT
TGGAGAAGAGATTGAGATGACCCCTATGGTGTTTGCTAAGGGTCTGGCTGACTCTGGCTGCTGGGGGGAC
AAGCTCTTTGGGCGACTGGTAAGCGAGGAGCTCCGAGGGGGTGGATATGGGTGTGGCCTTCGGAAGGCCT
CCCAGGCCAAGGTCATCTACGGGCTGGAACCCATCTTCGAGTCGGGCCGCACGTGCATCATCAAGGTGTC
CAGCCTGCTTGTGTTTGGGCCCAGCAGTGAGACTTCTCTTGTGGGCAGAAACTACGACGTCACCATCCAG
GGGTGCAAGATCCAGAACATGAGTCGGGAGTACTGCAAAATCTTCGCAGCAGAAGCCCGGGCCGCGCCTG
GCTTTGGGGAGGTGCCTGAGATCATCCCACTGTATCTGATCTACCGGCCTGCAAACAATATCCCATATGC
TACCCTGGAGGAAGACCTGGGCAAGCCCCTGGAGTCTTACTGTTCTCGGGAATGGGGCTGTGCTGAGGCT
CCGACAGCATCTGGCAGCTCTGAGGCCATGCAGAAATGCCAGACCTTCCAACACTGGCTGTATCAGTGGA
CAAATGGCAGCTTCCTTGTCACAGACTTGGCAGGGGTTGACTGGAAGATGACTGATGTGCAGATTGCTAC
CAAACTCCGAGGATACCAGGGCCTCAAGGAAAGCTGCTTCCCTGCCCTGCTGGACCGGTTCGCCTCCTCC
CACCAGTGCAATGCCTACTGTGAGCTGCTGGGGCTGACACCTCTCAAGGGCCCGGAGGCGGCCCACCCCC
AAGCCAAAGCCAAAGGCTCTAAGAGTCCATCTGCTGGCAGGAAAGGCTCCCAGCTGAGTCCTCAGCCCCA
GAAGAAAGGCCTCCCTAGTCCTCAGGGCACCCGGAAGAGTGCTCCAAGTTCCAAGGCCACCCCTCAGGCC
TCAGAGCCAGTCACCACTCAGTTGTTGGGACAGCCTCCCACCCAAGAGGAGGGCTCCAAGGCCCAGGGCA
TGCGGTAG

Translation (1705 aa):
MGSRRAPSRGWGAGGRSGAGGDGEDDGPVWIPSPASRSYLLSVRPETSLSSNRLSHPSSGRSTFCSIIAQ
LTEETQPLFETTLKSRSVSEDSDVRFTCIVTGYPEPEVTWYKDDTELDRYCGLPKYEITHQGNRHTLQLY
RCREEDAAIYQASAQNSKGIVSCSGVLEVGTMTEYKIHQRWFAKLKRKAAAKLREIEQSWKHEKAVPGEV
DTLRKLSPDRFQRKRRLSGAQAPGPSVPTREPEGGTLAAWQEGETETAQHSGLGLINSFASGEVTTNGEA
APENGEDGEHGLLTYICDAMELGPQRALKEESGAKKKKKDEESKQGLRKPELEKAAQSRRSSENCIPSSD
EPDSCGTQGPVGVEQVQTQPRGRAARGPGSSGTDSTRKPASAVGTPDKAQKAPGPGPGQEVYFSLKDMYL
ENTQAVRPLGEEGPQTLSVRAPGESPKGKAPLRARSEGVPGAPGQPTHSLTPQPTRPFNRKRFAPPKPKG
EATTDSKPISSLSQAPECGAQSLGKAPPQASVQVPTPPARRRHGTRDSTLQGQAGHRTPGEVLECQTTTA
PTMSASSSSDVASIGVSTSGSQGIIEPMDMETQEDGRTSANQRTGSKKNVQADGKIQVDGRTRGDGTQTA
QRTRADRKTQVDAGTQESKRPQSDRSAQKGMMTQGRAETQLETTQAGEKIQEDRKAQADKGTQEDRRMQG
EKGMQGEKGTQSEGSAPTAMEGQSEQEVATSLGPPSRTPKLPPTAGPRAPLNIECFVQTPEGSCFPKKPG
CLPRSEEAVVTASRNHEQTVLGPLSGNLMLPAQPPHEGSVEQVGGERCRGPQSSGPVEAKQEDSPFQCPK
EERPGGVPCMDQGGCPLAGLSQEVPTMPSLPGTGLTASPKAGPCSTPTSQHGSTATFLPSEDQVLMSSAP
TLHLGLGTPTQSHPPETMATSSEGACAQVPDVEGRTPGPRSCDPGLIDSLKNYLLLLLKLSSTETSGAGG
ESQVGAATGGLVPSATLTPTVEVAGLSPRTSRRILERVENNHLVQSAQTLLLSPCTSRRLTGLLDREVQA
GRQALAAARGSWGPGPSSLTVPAIVVDEEDPGLASEGASEGEGEVSPEGPGLLGASQESSMAGRLGEAGG
QAAPGQGPSAESIAQEPSQEEKFPGEALTGLPAATPEELALGARRKRFLPKVRAAGDGEATTPEERESPT
VSPRGPRKSLVPGSPGTPGRERRSPTQGRKASMLEVPRAEEELAAGDLGPSPKAGGLDTEVALDEGKQET
LAKPRKAKDLLKAPQVIRKIRVEQFPDASGSLKLWCQFFNILSDSVLTWAKDQRPVGEVGRSAGDEGPAA
LAIVQASPVDCGVYRCTIHNEHGSASTDFCLSPEVLSGFISREEGEVGEEIEMTPMVFAKGLADSGCWGD
KLFGRLVSEELRGGGYGCGLRKASQAKVIYGLEPIFESGRTCIIKVSSLLVFGPSSETSLVGRNYDVTIQ
GCKIQNMSREYCKIFAAEARAAPGFGEVPEIIPLYLIYRPANNIPYATLEEDLGKPLESYCSREWGCAEA
PTASGSSEAMQKCQTFQHWLYQWTNGSFLVTDLAGVDWKMTDVQIATKLRGYQGLKESCFPALLDRFASS
HQCNAYCELLGLTPLKGPEAAHPQAKAKGSKSPSAGRKGSQLSPQPQKKGLPSPQGTRKSAPSSKATPQA
SEPVTTQLLGQPPTQEEGSKAQGMR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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