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Report for CCDS41955.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41955.1 Public Homo sapiens 14 WDHD1 24 110 108 CCDS HistoryNCBI Gene:11169Re-query CCDS DB by CCDS ID:41955.1Re-query CCDS DB by GeneID:11169See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41955.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420358.2 ENSP00000399349.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420358.2Link to Ensembl Protein Viewer:ENSP00000399349.2Re-query CCDS DB by Nucleotide ID:ENST00000420358Re-query CCDS DB by Protein ID:ENSP00000399349
Original member Current member NCBI NM_001008396.3 NP_001008397.1 Accepted alive Link to Nucleotide Sequence:NM_001008396.3Link to Protein Sequence:NP_001008397.1Re-query CCDS DB by Nucleotide ID:NM_001008396Re-query CCDS DB by Protein ID:NP_001008397Link to BLAST:NP_001008397.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008397.1 1006 O75717-2 1006 100% 0 0

Chromosomal Locations for CCDS 41955.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 54941490 54941690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54944332 54944470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54955561 54955694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54957034 54957204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54957592 54957635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54962498 54962551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54962738 54962853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54962952 54963172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54966475 54966606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54967280 54967394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54981540 54981696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54984723 54984860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54987146 54987387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54989028 54989212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54991213 54991400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54995603 54995813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55000503 55000644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55000886 55000992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55002093 55002185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55007280 55007375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55008316 55008366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55008608 55008691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3021 nt):
ATGGATAGCAGCCAACAGAAAACATTTCGAGGACATGATGCCCCTGTTTTAAGTCTTTCCTTTGATCCTA
AGGACATCTTTCTGGCATCAGCTAGTTGTGATGGATCTGTCAGAGTGTGGCAAATTTCAGATCAGACATG
TGCTATTAGTTGGCCACTGCTACAAAAATGCAACGATGTGATAAATGCAAAATCAATCTGCAGACTTGCT
TGGCAGCCAAAAAGTGGGAAGTTACTGGCAATTCCTGTGGAAAAATCTGTTAAGCTATATAGAAGAGAAT
CTTGGAGTCATCAATTTGATCTTTCAGATAATTTCATCTCTCAGACCCTCAATATAGTAACCTGGTCTCC
CTGTGGGCAATATTTAGCTGCAGGTAGTATTAATGGTCTAATCATAGTTTGGAATGTGGAAACCAAAGAC
TGCATGGAAAGGGTGAAACATGAGAAAGGTTATGCAATTTGTGGTCTGGCATGGCATCCTACTTGTGGTC
GAATATCGTATACTGATGCGGAAGGAAATCTAGGGCTTCTAGAGAATGTTTGTGACCCCAGTGGAAAGAC
ATCAAGCAGTAAGGTATCTAGCAGAGTGGAAAAGGATTATAATGATCTTTTTGATGGAGATGATATGAGT
AATGCTGGTGATTTTCTAAATGACAATGCAGTTGAGATCCCTTCTTTTTCAAAAGGGATTATAAATGATG
ATGAGGATGATGAAGACCTCATGATGGCTTCAGGTCGTCCTAGACAGCGAAGTCACATCCTAGAAGATGA
TGAAAACTCAGTTGATATTTCAATGCTAAAAACTGGTTCTAGTCTTCTCAAAGAGGAGGAGGAAGATGGT
CAAGAAGGCAGCATTCACAATCTACCACTTGTAACATCCCAAAGGCCATTTTATGATGGACCCATGCCAA
CTCCCCGGCAAAAGCCATTTCAGTCAGGTTCTACACCGTTGCATCTCACTCACAGATTCATGGTGTGGAA
CTCTATTGGAATTATTCGCTGCTATAATGATGAGCAAGACAATGCCATAGATGTGGAGTTCCATGATACC
TCCATACACCATGCAACACACTTATCAAACACTTTGAATTATACAATAGCAGATCTTTCCCACGAAGCTA
TTTTGTTGGCATGTGAAAGCACTGATGAACTAGCAAGCAAGCTTCACTGCCTGCACTTTAGTTCTTGGGA
TTCAAGCAAAGAGTGGATAATAGACTTGCCTCAGAATGAGGATATTGAAGCCATATGTCTCGGTCAAGGA
TGGGCTGCTGCCGCTACTAGTGCCCTGCTTCTTCGATTGTTTACTATTGGAGGGGTTCAAAAAGAGGTAT
TCAGCCTTGCTGGACCTGTGGTGTCAATGGCAGGACATGGAGAACAGCTTTTCATTGTTTATCACAGAGG
TACAGGATTTGATGGGGATCAGTGCCTTGGAGTTCAACTGCTAGAGCTGGGGAAAAAGAAAAAACAAATT
TTGCATGGTGACCCTCTTCCTCTTACAAGGAAATCCTACCTTGCATGGATTGGGTTTTCAGCTGAAGGTA
CCCCTTGTTACGTGGATTCAGAAGGAATTGTTCGAATGCTTAACAGAGGACTTGGTAATACGTGGACTCC
TATATGTAATACAAGAGAGCACTGCAAAGGAAAATCTGATCACTACTGGGTGGTTGGTATCCATGAAAAT
CCCCAGCAACTAAGGTGCATTCCTTGTAAAGGTTCTCGGTTTCCCCCAACCCTTCCACGCCCTGCTGTTG
CTATATTATCCTTTAAGCTTCCTTACTGTCAGATTGCAACAGAGAAAGGACAAATGGAGGAGCAATTTTG
GCGTTCAGTTATATTTCACAACCACCTTGATTATTTAGCTAAAAATGGTTATGAATATGAAGAGAGCACT
AAAAATCAAGCAACAAAAGAGCAACAGGAACTTTTAATGAAAATGCTTGCGCTTTCTTGTAAACTGGAGC
GAGAATTCCGTTGTGTGGAACTTGCTGATCTAATGACTCAAAATGCTGTGAATTTAGCCATTAAATATGC
TTCTCGCTCTCGGAAATTAATACTGGCTCAAAAACTAAGTGAACTGGCTGTAGAGAAGGCAGCCGAATTG
ACAGCAACCCAGGTGGAAGAGGAAGAAGAAGAAGAAGATTTCAGAAAAAAGCTGAATGCTGGTTACAGCA
ATACTGCTACAGAGTGGAGCCAACCAAGGTTCAGAAATCAAGTTGAAGAAGATGCTGAGGACAGTGGAGA
AGCTGATGATGAAGAAAAACCAGAAATACATAAGCCTGGACAGAACTCGTTTTCCAAAAGTACAAATTCC
TCTGATGTTTCAGCTAAGTCAGGTGCAGTTACCTTTAGCAGCCAAGGACGAGTAAATCCCTTTAAGGTAT
CAGCCAGTTCCAAAGAACCAGCCATGTCAATGAATTCAGCACGTTCAACTAATATTTTAGACAATATGGG
CAAATCATCCAAGAAATCCACTGCACTTAGTCGAACTACAAATAATGAAAAGTCTCCCATTATAAAGCCT
CTGATTCCAAAGCCGAAGCCTAAGCAGGCATCTGCAGCATCCTATTTCCAGAAAAGAAATTCTCAAACTA
ATAAAACTGAGGAAGTGAAAGAAGAAAATCTTAAAAATGTATTATCTGAAACCCCAGCTATATGTCCTCC
TCAAAACACTGAAAACCAAAGGCCAAAGACCGGGTTCCAGATGTGGTTAGAAGAAAATAGAAGTAATATT
TTGTCTGACAATCCTGACTTTTCAGATGAAGCAGACATAATAAAAGAAGGAATGATTCGATTTAGAGTAT
TGTCAACTGAAGAAAGAAAGGTGTGGGCTAACAAAGCCAAAGGAGAAACGGCAAGTGAAGGAACTGAAGC
AAAGAAGCGAAAACGTGTGGTTGATGAAAGTGATGAAACAGAAAACCAGGAAGAAAAAGCAAAAGAGAAC
CTGAATTTGTCTAAAAAGCAGAAACCTTTAGATTTTTCTACAAATCAGAAACTATCAGCTTTTGCATTTA
AGCAGGAGTAA

Translation (1006 aa):
MDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQISDQTCAISWPLLQKCNDVINAKSICRLA
WQPKSGKLLAIPVEKSVKLYRRESWSHQFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIVWNVETKD
CMERVKHEKGYAICGLAWHPTCGRISYTDAEGNLGLLENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMS
NAGDFLNDNAVEIPSFSKGIINDDEDDEDLMMASGRPRQRSHILEDDENSVDISMLKTGSSLLKEEEEDG
QEGSIHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDT
SIHHATHLSNTLNYTIADLSHEAILLACESTDELASKLHCLHFSSWDSSKEWIIDLPQNEDIEAICLGQG
WAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQI
LHGDPLPLTRKSYLAWIGFSAEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHEN
PQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVIFHNHLDYLAKNGYEYEEST
KNQATKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRSRKLILAQKLSELAVEKAAEL
TATQVEEEEEEEDFRKKLNAGYSNTATEWSQPRFRNQVEEDAEDSGEADDEEKPEIHKPGQNSFSKSTNS
SDVSAKSGAVTFSSQGRVNPFKVSASSKEPAMSMNSARSTNILDNMGKSSKKSTALSRTTNNEKSPIIKP
LIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPAICPPQNTENQRPKTGFQMWLEENRSNI
LSDNPDFSDEADIIKEGMIRFRVLSTEERKVWANKAKGETASEGTEAKKRKRVVDESDETENQEEKAKEN
LNLSKKQKPLDFSTNQKLSAFAFKQE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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