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Report for CCDS10761.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10761.2 Public Homo sapiens 16 OGFOD1 24 110 108 CCDS HistoryNCBI Gene:55239Re-query CCDS DB by CCDS ID:10761.2See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10761.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000566157.6 ENSP00000457258.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000566157.6Link to Ensembl Protein Viewer:ENSP00000457258.1Re-query CCDS DB by Nucleotide ID:ENST00000566157Re-query CCDS DB by Protein ID:ENSP00000457258
Original member Current member NCBI NM_018233.4 NP_060703.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018233.4Link to Protein Sequence:NP_060703.3Re-query CCDS DB by Nucleotide ID:NM_018233Re-query CCDS DB by Protein ID:NP_060703Link to BLAST:NP_060703.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060703.3 542 Q8N543-1 542 100% 0 0

Chromosomal Locations for CCDS 10761.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 56451613 56451766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56453263 56453408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56458548 56458594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56462534 56462634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56466152 56466268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56466876 56466967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56467165 56467293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56467905 56468018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56470003 56470082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56470487 56470791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56474828 56474950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56475507 56475565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 56476044 56476205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1629 nt):
ATGAATGGGAAGCGGCCAGCGGAGCCCGGCCCAGCCCGGGTGGGAAAAAAGGGAAAGAAGGAGGTGATGG
CGGAGTTTTCGGACGCTGTTACGGAAGAAACCTTGAAAAAGCAGGTGGCTGAGGCCTGGAGCCGCAGGAC
GCCGTTCAGTCACGAAGTCATTGTCATGGACATGGACCCTTTTCTTCACTGTGTGATCCCAAACTTCATC
CAAAGCCAAGACTTCTTAGAAGGGCTTCAGAAGGAACTGATGAACTTGGACTTCCATGAGAAGTATAATG
ATTTATATAAGTTCCAGCAGTCTGATGATTTGAAGAAGAGAAGAGAGCCTCACATCTCCACTTTAAGGAA
AATTCTGTTTGAAGATTTCCGGTCCTGGCTTTCTGATATTTCTAAAATTGACCTGGAATCAACCATTGAC
ATGTCCTGTGCTAAATATGAATTCACTGATGCCCTGCTGTGCCATGATGATGAGCTGGAAGGGCGCCGGA
TTGCCTTCATCCTGTACCTGGTTCCTCCCTGGGACAGGAGCATGGGTGGTACCCTGGACCTGTACAGCAT
TGATGAACACTTTCAGCCGAAGCAGATTGTCAAGTCTCTTATCCCTTCGTGGAACAAACTGGTTTTCTTT
GAAGTATCTCCTGTGTCCTTTCACCAGGTGTCTGAAGTGCTGTCTGAAGAAAAGTCACGTTTGTCTATAA
GTGGCTGGTTTCATGGTCCATCATTGACTCGGCCTCCCAACTACTTTGAACCCCCCATACCTCGGAGCCC
TCACATCCCACAAGATCATGAGATTTTGTATGATTGGATCAACCCTACTTATCTGGACATGGATTACCAA
GTTCAAATTCAAGAAGAGTTTGAAGAAAGTTCTGAAATTCTCCTGAAGGAGTTTCTTAAGCCTGAGAAAT
TCACGAAAGTCTGTGAGGCCTTGGAGCATGGACATGTGGAATGGAGCAGCCGAGGTCCCCCTAACAAAAG
GTTTTATGAGAAAGCTGAGGAGAGTAAGCTTCCTGAGATATTGAAGGAGTGCATGAAGTTATTTCGCTCT
GAGGCACTATTCTTGCTGCTCTCCAACTTCACAGGCCTGAAGCTTCATTTCTTGGCCCCTTCGGAAGAAG
ATGAGATGAATGATAAAAAAGAGGCAGAAACCACTGATATCACTGAAGAAGGGACTAGCCATAGTCCTCC
TGAGCCAGAGAATAATCAGATGGCCATCAGCAACAACAGCCAACAGAGCAATGAGCAGACAGACCCAGAG
CCAGAGGAAAATGAAACAAAGAAAGAATCAAGTGTTCCCATGTGCCAAGGGGAACTGAGGCATTGGAAGA
CCGGTCACTACACTTTAATTCATGACCATAGCAAGGCTGAATTTGCCCTAGACTTAATTCTGTACTGTGG
CTGTGAAGGCTGGGAGCCAGAATATGGCGGTTTTACTTCTTACATTGCCAAAGGTGAAGATGAAGAGCTG
CTAACAGTGAATCCAGAAAGCAATTCTTTGGCATTGGTCTACAGAGACAGAGAGACTCTGAAATTTGTCA
AGCATATTAACCACCGAAGCCTGGAACAAAAGAAAACCTTCCCAAACAGAACAGGTTTCTGGGACTTTTC
ATTCATCTATTATGAATGA

Translation (542 aa):
MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDPFLHCVIPNFI
QSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTID
MSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFF
EVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQ
VQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRS
EALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE
PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEEL
LTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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