NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9607.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9607.1 Public Homo sapiens 14 CPNE6 24 110 108 CCDS HistoryNCBI Gene:9362Re-query CCDS DB by CCDS ID:9607.1Re-query CCDS DB by GeneID:9362See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9607.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397016.6 ENSP00000380211.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397016.6Link to Ensembl Protein Viewer:ENSP00000380211.2Re-query CCDS DB by Nucleotide ID:ENST00000397016Re-query CCDS DB by Protein ID:ENSP00000380211
Original member Current member EBI ENST00000689861.1 ENSP00000510387.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000689861.1Link to Ensembl Protein Viewer:ENSP00000510387.1Re-query CCDS DB by Nucleotide ID:ENST00000689861Re-query CCDS DB by Protein ID:ENSP00000510387
Original member Current member NCBI NM_001385056.1 NP_001371985.1 Accepted alive Link to Nucleotide Sequence:NM_001385056.1Link to Protein Sequence:NP_001371985.1Re-query CCDS DB by Nucleotide ID:NM_001385056Re-query CCDS DB by Protein ID:NP_001371985Link to BLAST:NP_001371985.1
Original member Current member NCBI NM_001385057.1 NP_001371986.1 Accepted alive Link to Nucleotide Sequence:NM_001385057.1Link to Protein Sequence:NP_001371986.1Re-query CCDS DB by Nucleotide ID:NM_001385057Re-query CCDS DB by Protein ID:NP_001371986Link to BLAST:NP_001371986.1
Original member Current member NCBI NM_001385058.1 NP_001371987.1 Accepted alive Link to Nucleotide Sequence:NM_001385058.1Link to Protein Sequence:NP_001371987.1Re-query CCDS DB by Nucleotide ID:NM_001385058Re-query CCDS DB by Protein ID:NP_001371987Link to BLAST:NP_001371987.1
Original member Current member NCBI NM_006032.4 NP_006023.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006032.4Link to Protein Sequence:NP_006023.1Re-query CCDS DB by Nucleotide ID:NM_006032Re-query CCDS DB by Protein ID:NP_006023Link to BLAST:NP_006023.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371985.1 557 O95741-1 557 100% 0 0
NP_001371986.1 557 O95741-1 557 100% 0 0
NP_001371987.1 557 O95741-1 557 100% 0 0
NP_006023.1 557 O95741-1 557 100% 0 0

Chromosomal Locations for CCDS 9607.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24072937 24073104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24073499 24073678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24074051 24074125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24074291 24074365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24074531 24074614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24074706 24074795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24075172 24075276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24075505 24075591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24075827 24075886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24076149 24076282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24076360 24076414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24076506 24076557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24076879 24077012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24077154 24077390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24077593 24077730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1674 nt):
ATGTCGGACCCTGAGATGGGATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCTCTCGGGTGGAGC
TGCGGGTGTCCTGCCATGGCCTCCTGGACCGGGACACACTCACCAAACCCCACCCCTGCGTGCTGCTCAA
GCTCTACTCTGATGAGCAGTGGGTGGAGGTAGAGCGCACAGAGGTGCTTCGCTCCTGTTCCAGCCCTGTC
TTCTCCCGGGTGCTGGCCCTTGAGTATTTTTTTGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTCGATG
CCGAGGACGGAGCCACCAGCCCCCGAAATGATACCTTCCTCGGCTCTACGGAGTGCACCTTGGGCCAGAT
TGTGTCACAAACCAAGGTCACTAAGCCATTATTGCTGAAGAATGGGAAGACTGCGGGCAAGTCCACCATC
ACGATCGTGGCCGAGGAGGTATCAGGCACAAACGACTATGTGCAACTCACCTTCAGAGCCTACAAGCTGG
ACAACAAGGATCTGTTCAGCAAGTCTGACCCTTTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGA
TCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAACCTGAACCCCAGCTGGGAGCCGTTCCGCCTGTCC
CTGCATTCCCTATGCAGCTGTGATGTTCACCGACCTCTCAAGTTCCTGGTGTATGACTATGACTCCAGTG
GGAAGCATGACTTCATCGGCGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGG
GCAGGAGATGCAGTGGGACTGTATCAACCCCAAGTATCGGGACAAGAAGAAGAATTACAAGAGCTCAGGG
ACGGTAGTGCTGGCCCAGTGCACGGTGGAGAAGGTGCACACCTTCCTGGATTACATCATGGGTGGCTGCC
AGATCAGCTTCACGGTGGCCATTGACTTCACCGCCTCCAATGGGGACCCGAGGAGCAGCCAGTCCCTGCA
CTGCCTCAGTCCCCGACAGCCCAACCACTACCTGCAGGCCCTGCGTGCAGTGGGAGGCATCTGCCAGGAC
TATGACAGTGATAAGCGGTTCCCAGCTTTTGGCTTTGGGGCTCGAATCCCCCCCAACTTCGAGGTGTCCC
ATGACTTTGCTATCAACTTTGACCCGGAAAATCCTGAATGTGAAGAGATCTCAGGGGTCATCGCCTCCTA
CCGTCGTTGCCTGCCCCAGATCCAGCTCTACGGCCCCACCAATGTGGCCCCCATCATCAACCGTGTGGCT
GAGCCGGCCCAGCGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTCGGTGCTGCTGGTGCTCACTGACG
GTGTGGTGAGCGACATGGCTGAGACTCGCACTGCTATCGTGCGTGCCTCCCGCCTGCCCATGTCCATCAT
CATCGTAGGCGTGGGCAATGCTGACTTCTCTGACATGCGGCTGCTGGATGGCGACGACGGCCCCTTGCGC
TGCCCCCGAGGGGTGCCTGCAGCCCGAGACATTGTCCAGTTCGTGCCCTTCCGAGACTTCAAGGATGCTG
CCCCCTCTGCACTCGCCAAGTGTGTCCTGGCTGAGGTGCCACGGCAGGTGGTGGAGTACTACGCCAGCCA
GGGCATCAGCCCTGGGGCTCCCAGGCCCTGCACACTGGCTACGACTCCCAGCCCTAGCCCGTGA

Translation (557 aa):
MSDPEMGWVPEPPTMTLGASRVELRVSCHGLLDRDTLTKPHPCVLLKLYSDEQWVEVERTEVLRSCSSPV
FSRVLALEYFFEEKQPLQFHVFDAEDGATSPRNDTFLGSTECTLGQIVSQTKVTKPLLLKNGKTAGKSTI
TIVAEEVSGTNDYVQLTFRAYKLDNKDLFSKSDPFMEIYKTNEDQSDQLVWRTEVVKNNLNPSWEPFRLS
LHSLCSCDVHRPLKFLVYDYDSSGKHDFIGEFTSTFQEMQEGTANPGQEMQWDCINPKYRDKKKNYKSSG
TVVLAQCTVEKVHTFLDYIMGGCQISFTVAIDFTASNGDPRSSQSLHCLSPRQPNHYLQALRAVGGICQD
YDSDKRFPAFGFGARIPPNFEVSHDFAINFDPENPECEEISGVIASYRRCLPQIQLYGPTNVAPIINRVA
EPAQREQSTGQATKYSVLLVLTDGVVSDMAETRTAIVRASRLPMSIIIVGVGNADFSDMRLLDGDDGPLR
CPRGVPAARDIVQFVPFRDFKDAAPSALAKCVLAEVPRQVVEYYASQGISPGAPRPCTLATTPSPSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH