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Report for CCDS31125.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31125.1 Public Homo sapiens 1 OR14I1 24 110 108 CCDS HistoryNCBI Gene:401994Re-query CCDS DB by CCDS ID:31125.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31125.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342623.5 ENSP00000339726.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000342623.5Link to Ensembl Protein Viewer:ENSP00000339726.3Re-query CCDS DB by Nucleotide ID:ENST00000342623Re-query CCDS DB by Protein ID:ENSP00000339726
Original member NCBI NM_001004734.2 NP_001004734.1 Updated not alive Link to Nucleotide Sequence:NM_001004734.2Link to Protein Sequence:NP_001004734.1Re-query CCDS DB by Nucleotide ID:NM_001004734Re-query CCDS DB by Protein ID:NP_001004734
NCBI NM_001004734.3 NP_001004734.1 Updated not alive Link to Nucleotide Sequence:NM_001004734.3Link to Protein Sequence:NP_001004734.1Re-query CCDS DB by Nucleotide ID:NM_001004734Re-query CCDS DB by Protein ID:NP_001004734
Current member NCBI NM_001004734.4 NP_001004734.1 Accepted alive Link to Nucleotide Sequence:NM_001004734.4Link to Protein Sequence:NP_001004734.1Re-query CCDS DB by Nucleotide ID:NM_001004734Re-query CCDS DB by Protein ID:NP_001004734Link to BLAST:NP_001004734.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004734.1 311 A6ND48 311 100% 0 0

Chromosomal Locations for CCDS 31125.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 248681369 248682304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGACAATCTCACAAAAGTGACAGAATTCCTGCTGATGGAGTTTTCTGGTATCTGGGAGCTGCAGGTGC
TGCACGCCGGGCTGTTTCTGCTGATTTATCTGGCAGTGCTGGTGGGGAACCTGCTCATCATTGCAGTCAT
CACTCTCGATCAGCATCTTCACACACCCATGTACTTCTTCCTGAAGAACCTCTCCGTTTTGGATCTGTGC
TACATCTCAGTCACTGTGCCTAAATCCATCCGTAACTCCCTGACTCGCAGAAGCTCCATCTCTTATCTTG
GCTGTGTGGCTCAAGTCTATTTTTTCTCTGCCTTTGCATCTGCTGAGCTGGCCTTCCTTACTGTCATGTC
TTATGACCGCTATGTTGCCATTTGCCACCCCCTCCAATACAGAGCCGTGATGACATCAGGAGGGTGCTAT
CAGATGGCAGTCACCACCTGGCTAAGCTGCTTTTCCTACGCAGCCGTCCACACTGGCAACATGTTTCGGG
AGCACGTTTGCAGATCCAGTGTGATCCACCAGTTCTTCCGTGACATCCCTCATGTGTTGGCCCTGGTTTC
CTGTGAGGTTTTCTTTGTAGAGTTTTTGACCCTGGCCCTGAGCTCATGCTTGGTTCTGGGATGCTTTATT
CTCATGATGATCTCCTATTTCCAAATCTTCTCAACGGTGCTCAGAATCCCTTCAGGACAGAGTCGAGCAA
AAGCCTTCTCCACCTGCTCCCCCCAGCTCATTGTCATCATGCTCTTTCTTACCACAGGGCTCTTTGCTGC
CTTAGGACCAATTGCAAAAGCTCTGTCCATTCAGGATTTAGTGATTGCTCTGACATACACAGTTTTGCCT
CCCTTCCTCAATCCCATCATATATAGTCTTAGGAATAAGGAGATTAAAACAGCCATGTGGAGACTCTTTG
TGAAGATATATTTTCTGCAAAAGTAG

Translation (311 aa):
MDNLTKVTEFLLMEFSGIWELQVLHAGLFLLIYLAVLVGNLLIIAVITLDQHLHTPMYFFLKNLSVLDLC
YISVTVPKSIRNSLTRRSSISYLGCVAQVYFFSAFASAELAFLTVMSYDRYVAICHPLQYRAVMTSGGCY
QMAVTTWLSCFSYAAVHTGNMFREHVCRSSVIHQFFRDIPHVLALVSCEVFFVEFLTLALSSCLVLGCFI
LMMISYFQIFSTVLRIPSGQSRAKAFSTCSPQLIVIMLFLTTGLFAALGPIAKALSIQDLVIALTYTVLP
PFLNPIIYSLRNKEIKTAMWRLFVKIYFLQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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