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Report for CCDS58688.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58688.1 Public Homo sapiens 19 ZNF211 24 110 108 CCDS HistoryNCBI Gene:10520Re-query CCDS DB by CCDS ID:58688.1Re-query CCDS DB by GeneID:10520See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58688.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391703.3 ENSP00000375584.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391703.3Link to Ensembl Protein Viewer:ENSP00000375584.3Re-query CCDS DB by Nucleotide ID:ENST00000391703Re-query CCDS DB by Protein ID:ENSP00000375584
Original member Current member NCBI NM_001265600.3 NP_001252529.1 Accepted alive Link to Nucleotide Sequence:NM_001265600.3Link to Protein Sequence:NP_001252529.1Re-query CCDS DB by Nucleotide ID:NM_001265600Re-query CCDS DB by Protein ID:NP_001252529Link to BLAST:NP_001252529.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001252529.1 503 Q13398-5 503 100% 0 0

Chromosomal Locations for CCDS 58688.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57634722 57634755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57640704 57642181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGCTGGAGAACTTTGCACTTACGTCCTCCCTGGGTTGTTGGTGTGGAGTGGAACATGAGGAAACACCTT
CTGAACAGAGAATTTCTGGAGAAAGAGTGCCACAGTTCAGGACTTCCAAAGAAGGTTCATCTTCCCAGAA
TGCCGACTCCTGTGAAATATGTTGCCTGGTCTTGAGAGATATTTTGCACTTGGCTGAACACCAAGGAACA
AACTGCGGGCAGAAACTACACACATGTGGAAAACAATTCTACATCAGTGCAAATCTTCAACAGCACCAGA
GGCAGCACATTACAGAGGCACCTTTCAGAAGTTATGTGGACACTGCCTCGTTTACACAGAGTTGCATAGT
CCATGTGTCGGAGAAACCCTTTACCTGCAGGGAGATCAGGAAAGACTTCCTGGCCAACATGAGGTTTCTC
CATCAAGACGCCACTCAAACAGGGGAGAAGCCAAATAACAGTAACAAGTGTGCGGTGGCCTTTTACAGTG
GAAAAAGTCATCACAACTGGGGAAAATGCAGTAAAGCCTTTAGCCACATAGACACACTTGTTCAGGACCA
GAGAATCCTCACTAGAGAAGGACTTTTTGAGTGCAGTAAATGTGGGAAAGCATGTACGCGAAGATGTAAC
CTCATTCAGCACCAGAAAGTCCACAGTGAAGAAAGGCCTTATGAATGCAATGAATGTGGAAAATTCTTTA
CCTACTACTCCAGTTTCATTATACATCAGAGAGTTCATACTGGAGAAAGGCCTTATGCGTGCCCTGAATG
TGGGAAATCGTTTAGTCAGATATACAGCCTCAATAGCCATAGGAAAGTTCACACTGGAGAAAGGCCTTAT
GAATGTGGGGAATGTGGGAAATCTTTTAGCCAAAGGTCCAACCTCATGCAGCATCGCAGAGTTCACACTG
GAGAAAGGCCTTATGAATGCAGCGAATGTGGGAAATCTTTTAGCCAAAACTTTAGCCTGATCTACCACCA
GAGAGTTCACACTGGAGAAAGACCTCATGAGTGCAATGAATGTGGAAAATCCTTTAGCCGAAGCTCCAGC
CTCATTCACCACCGGAGACTTCACACTGGAGAAAGACCCTATGAGTGCAGTAAATGTGGGAAGTCATTTA
AGCAAAGCTCCAGCTTCAGTTCACATCGGAAAGTCCACACAGGGGAAAGGCCTTATGTGTGTGGGGAATG
TGGGAAATCCTTTAGCCATAGCTCCAACCTTAAGAACCACCAGAGAGTTCACACTGGAGAAAGACCTGTT
GAGTGCAGTGAATGTAGCAAATCCTTTAGCTGTAAATCTAACCTCATTAAACACCTGAGAGTTCACACTG
GAGAAAGGCCTTATGAGTGCAGTGAATGTGGGAAATCCTTTAGCCAAAGTTCTAGCCTCATTCAACACCG
CAGAGTTCACACGGGAAAAAGGCCTTATCAGTGCAGTCAATGTGGGAAATCCTTTGGCTGCAAATCTGTC
CTCATTCAACACCAGAGAGTTCACATTGGAGAAAAGCCTTAG

Translation (503 aa):
MLENFALTSSLGCWCGVEHEETPSEQRISGERVPQFRTSKEGSSSQNADSCEICCLVLRDILHLAEHQGT
NCGQKLHTCGKQFYISANLQQHQRQHITEAPFRSYVDTASFTQSCIVHVSEKPFTCREIRKDFLANMRFL
HQDATQTGEKPNNSNKCAVAFYSGKSHHNWGKCSKAFSHIDTLVQDQRILTREGLFECSKCGKACTRRCN
LIQHQKVHSEERPYECNECGKFFTYYSSFIIHQRVHTGERPYACPECGKSFSQIYSLNSHRKVHTGERPY
ECGECGKSFSQRSNLMQHRRVHTGERPYECSECGKSFSQNFSLIYHQRVHTGERPHECNECGKSFSRSSS
LIHHRRLHTGERPYECSKCGKSFKQSSSFSSHRKVHTGERPYVCGECGKSFSHSSNLKNHQRVHTGERPV
ECSECSKSFSCKSNLIKHLRVHTGERPYECSECGKSFSQSSSLIQHRRVHTGKRPYQCSQCGKSFGCKSV
LIQHQRVHIGEKP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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