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Report for CCDS36989.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36989.2 Public Mus musculus 14 Olfm4 23 108 98 CCDS HistoryNCBI Gene:380924Re-query CCDS DB by CCDS ID:36989.2See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 36989.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000228749.1 ENSMUSP00000154285.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000228749.1Link to Ensembl Protein Viewer:ENSMUSP00000154285.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000228749Re-query CCDS DB by Protein ID:ENSMUSP00000154285
Original member Current member NCBI NM_001351947.1 NP_001338876.1 Accepted alive Link to Nucleotide Sequence:NM_001351947.1Link to Protein Sequence:NP_001338876.1Re-query CCDS DB by Nucleotide ID:NM_001351947Re-query CCDS DB by Protein ID:NP_001338876Link to BLAST:NP_001338876.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338876.1 505 Q3UZZ4 505 100% 0 0

Chromosomal Locations for CCDS 36989.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 80000325 80000504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 80006174 80006326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 80011778 80011990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 80014188 80014347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 80021119 80021930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1518 nt):
ATGAGTTACAGCCTTCTCTTTCTCCTGGCCCTTCAGTTCTGCCTTGGCTCTGCCTCCCGGACAACTCTGA
CCTCTGCACATTCCCGGGAATTGACCACACCTCCAACATCACCCCAGGCTACAGCTGCCTGGTTGCCTCC
GGGAGGCACTTCTTGGGCAGAAGGTGGGACTGTGTCTCAGCCACTTTCCAATTTCACTGGGTCTGTGGAC
AGCCATGGGACCTGCCAGTGTTCTGTTTCCCTGCCGGATACCGCCTTTCCCGCTGACAGAGTGGAGCGCT
TAGAGTACACAGCTCACATCCTTTCTCAGAAATTCGAGAGAGAGTTTTCTAAGGTGAAGGAGTATGTCCA
GCTAATAAGTGTGTATGAGAAGAGGCTCCTGAACCTGACGGTCCGAGTAGAGGTCATGGAGAAGGACAGC
ATCTCTTACACAGAACTGGACTTTGAGTTGATCAAGCTGGAAGTGAAGGAGATGCAAAAACTGGTCTTAC
AGCTGAAGAAGAATTTTGTTGGAAGTACACATATTATTGACATGCTCGAAGTGGAGATAAGGAATATGAC
CCTCTTGGTAGAGAAGCTGGAGTCTCTAGACCAAAACAATGTCCTTAGCATTCGCCGCCAGATCTTGGCT
CTGAAGACCAAGCTGAAAGAATGTGAGGCCTCCAAAAGTGACCTTGTGCCTGCCACACCCCCTCCTCCTG
CTCCTGGAAGCTGTAGTCATGGTGGCGTGGTGAACATCAGCGCTCCTTCTGTGATTCAGCTCAACTGGCT
GGGGTTTAGTTATAAATATGGTGCCTGGGGCCGAGATTACTCTCCTCAGCATCCAGAGAGAACCCTGTAC
TGGGTGGCACCTTTGAATACAGATGCAAGGGCTCTAGAGTATTACAGACTTTACGACTCATTGGACAATT
TGTTAATCTATTCCCACTTCCGAGACTATCGGATTCGCTATGGCCAAGGAGGTGGTACAGTAGCATTCAA
CAACAACCTGTATGTGAATTGGTACAATGGGGGGAACATTGCCAAAATTAATCTAACTACCAATGTAGTT
GATGTGAATCGGCCCCTCCCTCTGGCTGCCTACAATAATCGCTTCTCATATGCTAATGTGAATTGGCAAG
ACATTGACCTTGCTGTGGATGAGCAAGCACTGTGGGCAATTTATGCAACTGAGGCCAGCACTGGTAACAT
AGTGATTAGTAAACTCAATGACACCACTCTTGAGGTGATAAGCACTTGGGTTACCAAGCAGTACAAGCCA
TCTGTTTCGAATGCCTTCATGGTATGTGGAGTTCTTTATGCTACTCGCACTTTGAACACCAAAACAGAAG
AGATCTTTTACTATTATGACACAAACACAGAGAGGGAAGGCAACCTAGGCATCACAATGAGAAAGATGCA
GGAAAGAATTCAGAGCATCAATTACCATCCCTTTGACCAAAAACTTTATGTCTATAATGATGGTTATCTT
CTGAACTATGATCTTGTCTTCTTACAGACGCCCAGGCAACCTGTCTAA

Translation (505 aa):
MSYSLLFLLALQFCLGSASRTTLTSAHSRELTTPPTSPQATAAWLPPGGTSWAEGGTVSQPLSNFTGSVD
SHGTCQCSVSLPDTAFPADRVERLEYTAHILSQKFEREFSKVKEYVQLISVYEKRLLNLTVRVEVMEKDS
ISYTELDFELIKLEVKEMQKLVLQLKKNFVGSTHIIDMLEVEIRNMTLLVEKLESLDQNNVLSIRRQILA
LKTKLKECEASKSDLVPATPPPPAPGSCSHGGVVNISAPSVIQLNWLGFSYKYGAWGRDYSPQHPERTLY
WVAPLNTDARALEYYRLYDSLDNLLIYSHFRDYRIRYGQGGGTVAFNNNLYVNWYNGGNIAKINLTTNVV
DVNRPLPLAAYNNRFSYANVNWQDIDLAVDEQALWAIYATEASTGNIVISKLNDTTLEVISTWVTKQYKP
SVSNAFMVCGVLYATRTLNTKTEEIFYYYDTNTEREGNLGITMRKMQERIQSINYHPFDQKLYVYNDGYL
LNYDLVFLQTPRQPV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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