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Report for CCDS57603.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57603.1 Public Mus musculus 8 Tgfbr3l 23 108 98 CCDS HistoryNCBI Gene:100044509Re-query CCDS DB by CCDS ID:57603.1Re-query CCDS DB by GeneID:100044509See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 57603.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000110993.1 ENSMUSP00000106621.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000110993.1Link to Ensembl Protein Viewer:ENSMUSP00000106621.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000110993Re-query CCDS DB by Protein ID:ENSMUSP00000106621
Original member Current member NCBI NM_001195258.1 NP_001182187.1 Accepted alive Link to Nucleotide Sequence:NM_001195258.1Link to Protein Sequence:NP_001182187.1Re-query CCDS DB by Nucleotide ID:NM_001195258Re-query CCDS DB by Protein ID:NP_001182187Link to BLAST:NP_001182187.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182187.1 297 D3YZZ2 297 100% 0 0

Chromosomal Locations for CCDS 57603.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 4248283 4248352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4249205 4249341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4249426 4249746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4250267 4250381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4250467 4250625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4250849 4250921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4251293 4251311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (894 nt):
ATGGTGGGCACTGCGCTCCTGCTCCTGGCCCTGCTCCCTGGGACCTCCAGTAAGCACGGTACACCACGTG
CACCTCTGTTACCTGGGGCGCCTGGCCCCTGGCTGCGCAGACCCCTTTTCAGTCTGGAGTTATCAGATGC
AGAGGACGCGTTCCCTCGCCGCGCAGGGCCACTGGAGGTTCCGGCGGACAGCCATGTGTTTGTGCAGGCG
GCCCTGGCCCGTCCTTCACCGAGATGGGGCCTAGCCCTTCACCGATGCTCAGTAACACCTTCTTCACGCC
CGACCCTGGGGCCTGCCCTGGTGCTTCTACGTGGGGGCTGCCCCGCCGACGACTCTGTCAGCTTCTCACC
ACCTCCACGCCCGGATGCTGCTAGCGTCTCACGCTTCAGCTTTCGCCTGCGTCCGGTATTCAATGCCTCA
GTACAGTTCTTGCACTGCCAGATCAGCCGTTGCCGCCGTCGCAGCAGTCACCACCGCCGAGCTGTCCGCC
TGACACCAGTGCCTTTGACCCCACCAGCACCATTGCGGTGTCTGCCTCAGGATGAGGCATGTGCGGGCAG
CAGCTTGAGCCTTGGTACCGACAGCCCCCACCTGCACATGCTGACACAGCCCATCGTGGTCACAATACCT
CGTCCGTCCCCTAGGCCATCCAAGAGTCTCCCAGGCAGGTCGGTACACCCGGAGCCACCCGCTCCAGCCC
CTGCAGCACTGGAGCCTGCACCGGTGGTGGCATTGGTGTTGGCGGCCTTCGTGCTGGGTGCTGCGCTGGC
CGCTGGGCTTGGTCTCGTCTGCGCACACTCAGCACCCCCACCCCCAGGCCCGCCTCCTAGAGCTTCTCTC
AGCGGCCCCCAGCTCCAGAGACCCCCAGTAGGCAGAGATGGCACCACCCAGTGA

Translation (297 aa):
MVGTALLLLALLPGTSSKHGTPRAPLLPGAPGPWLRRPLFSLELSDAEDAFPRRAGPLEVPADSHVFVQA
ALARPSPRWGLALHRCSVTPSSRPTLGPALVLLRGGCPADDSVSFSPPPRPDAASVSRFSFRLRPVFNAS
VQFLHCQISRCRRRSSHHRRAVRLTPVPLTPPAPLRCLPQDEACAGSSLSLGTDSPHLHMLTQPIVVTIP
RPSPRPSKSLPGRSVHPEPPAPAPAALEPAPVVALVLAAFVLGAALAAGLGLVCAHSAPPPPGPPPRASL
SGPQLQRPPVGRDGTTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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