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Report for CCDS10939.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10939.1 Public Homo sapiens 16 OSGIN1 24 110 108 CCDS HistoryNCBI Gene:29948Re-query CCDS DB by CCDS ID:10939.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10939.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361711.7 ENSP00000355374.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361711.7Link to Ensembl Protein Viewer:ENSP00000355374.3Re-query CCDS DB by Nucleotide ID:ENST00000361711Re-query CCDS DB by Protein ID:ENSP00000355374
Original member Current member EBI ENST00000393306.6 ENSP00000376983.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393306.6Link to Ensembl Protein Viewer:ENSP00000376983.1Re-query CCDS DB by Nucleotide ID:ENST00000393306Re-query CCDS DB by Protein ID:ENSP00000376983
Original member Current member NCBI NM_182981.3 NP_892026.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182981.3Link to Protein Sequence:NP_892026.1Re-query CCDS DB by Nucleotide ID:NM_182981Re-query CCDS DB by Protein ID:NP_892026Link to BLAST:NP_892026.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_892026.1 477 Q9UJX0 477 100% 0 0

Chromosomal Locations for CCDS 10939.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 83957672 83957738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 83959260 83959396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 83960569 83960760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 83960981 83961072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 83965062 83966007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1434 nt):
ATGAGCTCCTCCAGAAAGGACCACCTCGGCGCCAGCAGCTCAGAGCCCCTCCCGGTCATCATTGTGGGTA
ACGGCCCCTCTGGTATCTGCCTGTCCTACCTGCTCTCCGGCTACACACCCTACACGAAGCCAGATGCCAT
CCACCCACACCCCCTGCTGCAGAGGAAGCTCACCGAGGCCCCGGGGGTCTCCATCCTGGACCAGGACCTG
GACTACCTGTCCGAAGGCCTCGAAGGCCGATCCCAAAGCCCCGTGGCCCTGCTCTTTGATGCCCTTCTAC
GCCCAGACACAGACTTTGGGGGAAACATGAAGTCGGTCCTCACCTGGAAGCACCGGAAGGAGCACGCCAT
CCCCCACGTGGTTCTGGGCCGGAACCTCCCCGGGGGAGCCTGGCACTCCATCGAAGGCTCCATGGTGATC
CTGAGCCAAGGCCAGTGGATGGGGCTCCCGGACCTGGAGGTCAAGGACTGGATGCAGAAGAAGCGAAGAG
GTCTTCGCAACAGCCGGGCCACTGCCGGGGACATCGCCCACTACTACAGGGACTACGTGGTCAAGAAGGG
TCTGGGGCATAACTTTGTGTCCGGTGCTGTAGTCACAGCCGTGGAGTGGGGGACCCCCGATCCCAGCAGC
TGTGGGGCCCAGGACTCCAGCCCCCTCTTCCAGGTGAGCGGCTTCCTGACCAGGAACCAGGCCCAGCAGC
CCTTCTCGCTGTGGGCCCGCAACGTGGTCCTCGCCACAGGCACGTTCGACAGCCCGGCCCGGCTGGGCAT
CCCCGGGGAGGCCCTGCCCTTCATCCACCATGAGCTGTCTGCCCTGGAGGCCGCCACAAGGGTGGGTGCG
GTGACCCCGGCCTCAGACCCTGTCCTCATCATTGGCGCGGGGCTGTCAGCGGCCGACGCGGTCCTCTACG
CCCGCCACTACAACATCCCGGTGATCCATGCCTTCCGCCGGGCCGTGGACGACCCTGGCCTGGTGTTCAA
CCAGCTGCCCAAGATGCTGTACCCCGAGTACCACAAGGTGCACCAGATGATGCGGGAGCAGTCCATCCTG
TCGCCCAGCCCCTATGAGGGTTACCGCAGCCTCCCCAGGCACCAGCTGCTGTGCTTCAAGGAAGACTGCC
AGGCCGTGTTCCAGGACCTCGAGGGTGTCGAGAAGGTGTTTGGGGTCTCCCTGGTGCTGGTCCTCATCGG
CTCCCACCCCGACCTCTCCTTCCTGCCTGGGGCAGGGGCTGACTTTGCAGTGGATCCTGACCAGCCGCTG
AGCGCCAAGAGGAACCCCATTGACGTGGACCCCTTCACCTACCAGAGCACCCGCCAGGAGGGCCTGTACG
CCATGGGGCCGCTGGCCGGGGACAACTTCGTGAGGTTTGTGCAGGGGGGCGCCTTGGCTGTGGCCAGCTC
CCTGCTAAGGAAGGAGACCAGGAAGCCACCCTAA

Translation (477 aa):
MSSSRKDHLGASSSEPLPVIIVGNGPSGICLSYLLSGYTPYTKPDAIHPHPLLQRKLTEAPGVSILDQDL
DYLSEGLEGRSQSPVALLFDALLRPDTDFGGNMKSVLTWKHRKEHAIPHVVLGRNLPGGAWHSIEGSMVI
LSQGQWMGLPDLEVKDWMQKKRRGLRNSRATAGDIAHYYRDYVVKKGLGHNFVSGAVVTAVEWGTPDPSS
CGAQDSSPLFQVSGFLTRNQAQQPFSLWARNVVLATGTFDSPARLGIPGEALPFIHHELSALEAATRVGA
VTPASDPVLIIGAGLSAADAVLYARHYNIPVIHAFRRAVDDPGLVFNQLPKMLYPEYHKVHQMMREQSIL
SPSPYEGYRSLPRHQLLCFKEDCQAVFQDLEGVEKVFGVSLVLVLIGSHPDLSFLPGAGADFAVDPDQPL
SAKRNPIDVDPFTYQSTRQEGLYAMGPLAGDNFVRFVQGGALAVASSLLRKETRKPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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