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Report for CCDS32660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32660.1 Public Homo sapiens 17 COA3 24 110 108 CCDS HistoryNCBI Gene:28958Re-query CCDS DB by CCDS ID:32660.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32660.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328434.8 ENSP00000354762.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328434.8Link to Ensembl Protein Viewer:ENSP00000354762.5Re-query CCDS DB by Nucleotide ID:ENST00000328434Re-query CCDS DB by Protein ID:ENSP00000354762
Original member Current member NCBI NM_001040431.3 NP_001035521.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001040431.3Link to Protein Sequence:NP_001035521.1Re-query CCDS DB by Nucleotide ID:NM_001040431Re-query CCDS DB by Protein ID:NP_001035521Link to BLAST:NP_001035521.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035521.1 106 Q9Y2R0 106 100% 0 0

Chromosomal Locations for CCDS 32660.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 42798061 42798167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42798468 42798681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (321 nt):
ATGGCGTCTTCGGGAGCTGGTGACCCTCTGGATTCTAAGCGTGGAGAGGCCCCGTTCGCTCAGCGTATCG
ACCCGACTCGGGAGAAGCTGACACCCGAGCAACTGCATTCCATGCGGCAGGCGGAGCTTGCCCAGTGGCA
GAAGGTCCTACCACGGCGGCGAACCCGGAACATCGTGACCGGCCTAGGCATCGGGGCCCTGGTGTTGGCT
ATTTATGGTTACACCTTCTACTCGATTTCCCAGGAGCGTTTCCTAGATGAGCTAGAAGACGAGGCCAAAG
CTGCCCGAGCCCGAGCTCTGGCAAGGGCGTCAGGGTCCTAA

Translation (106 aa):
MASSGAGDPLDSKRGEAPFAQRIDPTREKLTPEQLHSMRQAELAQWQKVLPRRRTRNIVTGLGIGALVLA
IYGYTFYSISQERFLDELEDEAKAARARALARASGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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