NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS47932.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47932.1 Public Homo sapiens 8 ZNF707 24 110 108 CCDS HistoryNCBI Gene:286075Re-query CCDS DB by CCDS ID:47932.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47932.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358656.9 ENSP00000351482.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358656.9Link to Ensembl Protein Viewer:ENSP00000351482.4Re-query CCDS DB by Nucleotide ID:ENST00000358656Re-query CCDS DB by Protein ID:ENSP00000351482
Original member Current member EBI ENST00000418203.3 ENSP00000413215.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000418203.3Link to Ensembl Protein Viewer:ENSP00000413215.2Re-query CCDS DB by Nucleotide ID:ENST00000418203Re-query CCDS DB by Protein ID:ENSP00000413215
Original member Current member EBI ENST00000532205.5 ENSP00000436212.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000532205.5Link to Ensembl Protein Viewer:ENSP00000436212.1Re-query CCDS DB by Nucleotide ID:ENST00000532205Re-query CCDS DB by Protein ID:ENSP00000436212
Original member Current member EBI ENST00000532158.5 ENSP00000436250.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000532158.5Link to Ensembl Protein Viewer:ENSP00000436250.1Re-query CCDS DB by Nucleotide ID:ENST00000532158Re-query CCDS DB by Protein ID:ENSP00000436250
Original member Current member NCBI NM_001100598.2 NP_001094068.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001100598.2Link to Protein Sequence:NP_001094068.1Re-query CCDS DB by Nucleotide ID:NM_001100598Re-query CCDS DB by Protein ID:NP_001094068Link to BLAST:NP_001094068.1
Original member Current member NCBI NM_001100599.2 NP_001094069.1 Accepted alive Link to Nucleotide Sequence:NM_001100599.2Link to Protein Sequence:NP_001094069.1Re-query CCDS DB by Nucleotide ID:NM_001100599Re-query CCDS DB by Protein ID:NP_001094069Link to BLAST:NP_001094069.1
Original member Current member NCBI NM_001288805.2 NP_001275734.1 Accepted alive Link to Nucleotide Sequence:NM_001288805.2Link to Protein Sequence:NP_001275734.1Re-query CCDS DB by Nucleotide ID:NM_001288805Re-query CCDS DB by Protein ID:NP_001275734Link to BLAST:NP_001275734.1
Original member Current member NCBI NM_001288806.2 NP_001275735.1 Accepted alive Link to Nucleotide Sequence:NM_001288806.2Link to Protein Sequence:NP_001275735.1Re-query CCDS DB by Nucleotide ID:NM_001288806Re-query CCDS DB by Protein ID:NP_001275735Link to BLAST:NP_001275735.1
Original member Current member NCBI NM_173831.4 NP_776192.2 Accepted alive Link to Nucleotide Sequence:NM_173831.4Link to Protein Sequence:NP_776192.2Re-query CCDS DB by Nucleotide ID:NM_173831Re-query CCDS DB by Protein ID:NP_776192Link to BLAST:NP_776192.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094068.1 371 Q96C28 371 100% 0 0
NP_001094069.1 371 Q96C28 371 100% 0 0
NP_001275734.1 371 Q96C28 371 100% 0 0
NP_001275735.1 371 Q96C28 371 100% 0 0
NP_776192.2 371 Q96C28 371 100% 0 0

Chromosomal Locations for CCDS 47932.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 143690109 143690123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143691073 143691199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143691600 143691713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 143693671 143694530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1116 nt):
ATGGACATGGCCCAGGAGCCAGTGACCTTCAGGGACGTGGCCATCTACTTCTCAAGGGAGGAGTGGGCGT
GTCTGGAACCCAGCCAGAGGGCCCTCTACCGGGACGTGATGCTGGACAACTTCAGCAGTGTGGCTGCTCT
GGGATTTTGCAGCCCCAGACCAGACCTCGTCTCTCGCCTGGAACAGTGGGAGGAGCCGTGGGTTGAAGAC
CGGGAGAGACCTGAGTTCCAGGCAGTGCAGAGGGGACCCCGGCCAGGGGCAAGGAAGTCTGCAGACCCCA
AGAGACCTTGTGATCATCCAGCTTGGGCTCACAAGAAAACCCACGTGCGGCGAGAAAGAGCCAGGGAAGG
AAGCAGCTTTAGGAAGGGCTTCAGGCTGGACACGGATGACGGGCAGCTTCCCAGAGCTGCTCCAGAAAGG
ACAGACGCCAAGCCCACGGCTTTCCCGTGTCAGGTGCTCACGCAGCGTTGTGGGCGGCGGCCGGGCCGCA
GAGAGCGCCGGAAGCAGCGCGCAGTAGAGCTGTCATTCATCTGCGGCACGTGCGGGAAGGCGCTCAGCTG
CCACAGCCGGCTGCTCGCTCACCAGACGGTGCACACGGGAACCAAGGCCTTCGAGTGCCCCGAGTGCGGC
CAGACCTTCCGGTGGGCTTCAAACCTGCAGCGCCACCAGAAGAACCACACGCGCGAGAAGCCCTTCTGCT
GCGAGGCCTGCGGGCAGGCGTTCAGCCTGAAGGACCGCCTGGCTCAGCACCGCAAGGTCCACACCGAGCA
CAGGCCCTACTCGTGTGGCGACTGTGGGAAAGCCTTCAAGCAGAAGTCCAACCTTCTCAGACACCAGCTG
GTGCACACCGGGGAGCGGCCGTTCTACTGCGCGGACTGCGGCAAAGCCTTCCGGACCAAGGAGAACCTCA
GCCACCACCAGAGGGTCCACAGCGGGGAGAAGCCCTACACCTGTGCCGAGTGCGGCAAGTCCTTCCGGTG
GCCCAAGGGCTTCAGCATCCACCGGAGGCTGCACCTGACGAAGAGGTTCTACGAGTGCGGCCACTGTGGG
AAAGGCTTCCGTCACCTGGGGTTCTTCACGCGGCATCAGAGGACTCACAGGCACGGGGAGGTGTAG

Translation (371 aa):
MDMAQEPVTFRDVAIYFSREEWACLEPSQRALYRDVMLDNFSSVAALGFCSPRPDLVSRLEQWEEPWVED
RERPEFQAVQRGPRPGARKSADPKRPCDHPAWAHKKTHVRRERAREGSSFRKGFRLDTDDGQLPRAAPER
TDAKPTAFPCQVLTQRCGRRPGRRERRKQRAVELSFICGTCGKALSCHSRLLAHQTVHTGTKAFECPECG
QTFRWASNLQRHQKNHTREKPFCCEACGQAFSLKDRLAQHRKVHTEHRPYSCGDCGKAFKQKSNLLRHQL
VHTGERPFYCADCGKAFRTKENLSHHQRVHSGEKPYTCAECGKSFRWPKGFSIHRRLHLTKRFYECGHCG
KGFRHLGFFTRHQRTHRHGEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH