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Report for CCDS6746.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6746.1 Public Homo sapiens 9 INVS 24 110 108 CCDS HistoryNCBI Gene:27130Re-query CCDS DB by CCDS ID:6746.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6746.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262457.7 ENSP00000262457.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262457.7Link to Ensembl Protein Viewer:ENSP00000262457.2Re-query CCDS DB by Nucleotide ID:ENST00000262457Re-query CCDS DB by Protein ID:ENSP00000262457
Original member Current member NCBI NM_014425.5 NP_055240.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014425.5Link to Protein Sequence:NP_055240.2Re-query CCDS DB by Nucleotide ID:NM_014425Re-query CCDS DB by Protein ID:NP_055240Link to BLAST:NP_055240.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055240.2 1065 Q9Y283-1 1065 100% 0 0

Chromosomal Locations for CCDS 6746.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 100104522 100104627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100126383 100126549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100226062 100226235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100229660 100229827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100240060 100240240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100242570 100242679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100246616 100246787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100252283 100252438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100252907 100253136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100264822 100264928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100272864 100273076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100284320 100284603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100292326 100293043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100296917 100297146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100297936 100298010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 100300568 100300674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3198 nt):
ATGAACAAGTCAGAGAACCTGCTGTTTGCTGGTTCATCATTAGCATCACAAGTCCATGCTGCTGCCGTTA
AT
GGAGATAAGGGTGCTCTACAGAGGCTCATCGTAGGAAACTCTGCTCTTAAAGACAAAGAAGATCAGTT
T
GGGAGAACACCACTTATGTATTGCGTGTTGGCTGACAGATTGGATTGTGCAGATGCTCTTCTGAAGGCA
GGA
GCAGATGTGAATAAAACTGACCATAGCCAGAGAACAGCCCTCCATCTTGCAGCCCAGAAGGGAAATT
AT
CGTTTCATGAAACTCTTACTTACACGCAGAGCAAACTGGATGCAAAAGGATCTGGAAGAGATGACTCC
T
TTGCACTTGACCACCCGGCACAGGAGCCCTAAGTGTTTGGCACTTCTGCTGAAGTTTATGGCACCAGGA
GAA
GTGGATACACAGGATAAAAACAAGCAAACAGCTCTGCATTGGAGTGCCTACTACAATAACCCTGAGC
AT
GTGAAGCTGCTCATCAAGCATGATTCTAACATTGGGATTCCTGATGTTGAAGGCAAGATCCCACTTCA
C
TGGGCAGCCAACCATAAAGATCCAAGTGCTGTTCACACAGTGAGATGCATTCTGGATGCTGCTCCAACA
GAG
TCTTTACTGAACTGGCAAGACTACGAGGGTCGAACTCCTCTTCACTTTGCAGTTGCTGATGGGAATG
TG
ACCGTGGTTGATGTCTTGACCTCATATGAAAGCTGCAATATAACGTCTTATGATAACTTATTTCGAAC
C
CCACTGCACTGGGCAGCTTTATTAGGCCATGCACAGATTGTCCATCTCCTTTTAGAAAGAAATAAGTCT
GGA
ACTATCCCATCTGACAGCCAAGGAGCCACACCTTTGCACTATGCTGCTCAGAGTAACTTTGCTGAAA
CG
GTTAAAGTGTTTTTAAAACATCCTTCAGTGAAAGATGATTCAGACCTGGAAGGAAGAACATCCTTTAT
G
TGGGCAGCTGGCAAAGGCAGTGATGATGTCCTTAGAACTATGCTGAGCTTAAAATCGGACATAGATATT
AAC
ATGGCTGACAAATATGGAGGTACAGCTTTGCATGCTGCTGCTCTTTCTGGCCATGTCAGCACCGTGA
AG
TTATTACTGGAAAATAATGCTCAAGTAGATGCTACTGATGTTATGAAACATACTCCACTTTTCCGAGC
C
TGTGAGATGGGACACAAAGATGTGATTCAGACACTCATTAAAGGTGGAGCAAGGGTAGATCTAGTTGAC
CAA
GATGGACATTCTCTTCTACATTGGGCAGCACTGGGAGGAAATGCTGATGTTTGCCAGATATTAATAG
AA
AATAAGATCAATCCAAATGTCCAGGATTATGCAGGAAGAACCCCTTTGCAGTGTGCAGCATATGGAGG
C
TATATCAACTGCATGGCAGTTCTCATGGAAAACAATGCAGACCCTAACATTCAAGACAAAGAGGGAAGA
ACA
GCTTTGCATTGGTCCTGCAACAATGGATACCTTGATGCCATTAAATTACTGCTAGACTTTGCTGCTT
TC
CCTAATCAGATGGAAAACAATGAAGAGAGATACACACCCCTTGATTATGCTTTGCTTGGTGAGCGCCA
T
GAAGTGATCCAGTTCATGTTGGAGCACGGTGCCCTGTCCATCGCAGCCATACAAGACATCGCCGCCTTC
AAA
ATCCAAGCTGTCTACAAAGGGTACAAGGTCAGAAAAGCCTTCCGAGACAGGAAAAATCTCCTCATGA
AG
CATGAACAGTTGAGAAAAGATGCTGCTGCCAAAAAGCGAGAGGAAGAAAACAAACGAAAAGAGGCAGA
A
CAGCAAAAAGGAAGGCGGAGCCCAGATTCCTGCAGACCCCAGGCCCTTCCCTGTCTGCCTAGCACCCAG
GAT
GTGCCCAGCAGGCAGAGCCGGGCCCCCAGCAAGCAGCCTCCTGCTGGCAACGTGGCCCAAGGCCCTG
AG
CCAAGAGACAGCAGAGGATCTCCAGGAGGGTCTCTAGGCGGAGCCCTCCAGAAGGAGCAGCATGTTTC
C
TCAGATTTGCAGGGAACAAACTCCAGAAGGCCAAATGAAACAGCCAGAGAACATTCTAAAGGCCAATCT
GCT
TGTGTCCACTTCAGACCCAATGAAGGCAGTGATGGAAGCAGGCATCCAGGAGTTCCCTCTGTTGAGA
AG
TCCAGAGGTGAGACAGCTGGCGATGAGCGGTGTGCAAAGGGGAAAGGCTTCGTGAAGCAGCCCTCCTG
T
ATCAGGGTGGCTGGGCCTGATGAGAAAGGAGAGGACTCCAGGCGGGCAGCTGCAAGCCTTCCACCGCAC
GAT
AGCCACTGGAAGCCCAGCAGGCGGCATGACACAGAACCCAAGGCCAAATGTGCCCCCCAGAAAAGGC
GC
ACTCAAGAGCTCAGAGGAGGAAGGTGCTCTCCGGCTGGTTCTAGCCGCCCTGGCAGTGCCCGGGGGGA
G
GCGGTCCATGCTGGGCAGAATCCTCCCCACCATCGTACACCAAGAAACAAAGTGACACAAGCCAAGCTC
ACA
GGAGGGCTCTATTCACATTTGCCACAGAGCACAGAGGAGTTGAGGTCAGGAGCTAGGAGGCTGGAGA
CA
TCTACCCTGTCCGAGGACTTTCAGGTATCTAAGGAGACTGATCCAGCACCTGGTCCCCTCTCTGGGCA
G
AGTGTGAATATTGACCTTCTCCCCGTAGAGCTCCGACTGCAGATAATTCAGAGAGAACGAAGGAGGAAG
GAG
CTGTTTCGCAAAAAGAACAAGGCAGCAGCAGTCATCCAGCGCGCCTGGCGAAGCTACCAGCTCAGGA
AG
CACCTGTCCCACCTTCGGCATATGAAGCAGCTTGGAGCTGGAGATGTGGACAGATGGAGGCAAGAGTC
T
ACAGCATTGCTCCTCCAGGTTTGGAGGAAGGAACTGGAACTAAAATTCCCCCAAACCACTGCAGTAAGC
AAG
GCCCCCAAGAGTCCATCCAAGGGCACCTCAGGCACAAAGTCCACCAAGCACTCAGTGCTTAAGCAAA
TC
TATGGTTGTTCTCACGAAGGGAAAATACATCATCCTACAAGATCTGTAAAAGCCTCTTCTGTGCTGCG
T
CTCAACTCAGTGAGCAACCTACAGTGTATACATCTCCTTGAGAACAGTGGAAGATCAAAGAACTTTTCT
TAT
AACCTGCAATCAGCTACTCAGCCAAAAAACAAAACAAAACCTTGA


Translation (1065 aa):
MNKSENLLFAGSSLASQVHAAAVNGDKGALQRLIVGNSALKDKEDQFGRTPLMYCVLADRLDCADALLKA
G
ADVNKTDHSQRTALHLAAQK
GNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHRSPKCLALLLKFMAPG
E
VDTQDKNK
QTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPT
E
SLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALL
GHAQIVHLLLERNKS
G
TIPSDSQGATPLHYAAQSNFA
ETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLSLKSDIDI
N
MADKYGGT
ALHAAALSGHVSTVKLLLENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDLVD
Q
DGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKE
GR
T
ALHWSCNNGYLDAIKLLLDFAAFPNQMENNEE
RYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAF
K
IQAVYKGYKVRKAFRDRKNLLMKHEQLRKDAAA
KKREEENKRKEAEQQKGRRSPDSCRPQALPCLPSTQ
D
VPSRQSRAPSKQPPAGNVAQGPEPRDSRGSPGGSLGGALQKEQHVSSDLQGTNSRRPN
ETAREHSKGQS
A
CVHFRPNEGSDGSRHPGVPSVEKSRGETAGDERCAKGKGFVKQPSCIRVAGPDEKGEDSRRAAASLPPH
D
SHWKPSRRHDTEPKAKCAPQKRRTQELRGGRCSPAGSSRPGSARGEAVHAGQNPPHHRTPRNKVTQAKL
T
GGLYSHLPQSTEELRSGARRLETSTLSEDFQVSKETDPAPGPLSGQSVNIDLLPVELRLQIIQRERRRK
E
LFRKKNKAAAVIQRAWR
SYQLRKHLSHLRHMKQLGAGDVDRWRQESTALLLQVWRKELELKFPQTTAVS
K
APKSPSKGTSGTKSTKHSVLKQIY
GCSHEGKIHHPTRSVKASSVLRLNSVSNLQCIHLLENSGRSKNFS
Y
NLQSATQPKNKTKP




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser